Evidence map›Paper›PMID 41118258›Full record

ArticleJCI insight2025

PNPLA3-I148M genetic variant rewires lipid metabolism to drive programmed cell death in human hepatocytes.

Rodrigo M Florentino, Olamide Animasahun, Nils Haep, Minal Nenwani, Kehinde Omoloja, Leyla Nurcihan Altay, Abhinav Achreja, Kazutoyo Morita, Takashi Motomura, Ricardo Diaz-Aragon and 28 more

Abstract read
In one paragraph

Article in JCI insight, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors.

Rodrigo M FlorentinoDepartment of Pathology.
Olamide AnimasahunCenter for Transcriptional Medicine, and.
Nils HaepDepartment of Pathology.
Minal NenwaniBiointerfaces Institute.
Kehinde OmolojaDepartment of Chemical Engineering.
Leyla Nurcihan AltayCenter for Transcriptional Medicine, and.
Abhinav AchrejaBiointerfaces Institute.
Kazutoyo MoritaDepartment of Pathology.
Takashi MotomuraDepartment of Pathology.
Ricardo Diaz-AragonDepartment of Pathology.
Lanuza Ap FaccioliDepartment of Pathology.
Yiyue SunDepartment of Pathology.
Zhenghao LiuDepartment of Pathology.
Zhiping HuDepartment of Pathology.
Bo YangDepartment of Pathology.
Fulei WuchuBiointerfaces Institute.
Ajay ShankaranDepartment of Chemical Engineering.
Miya PaserbaBiointerfaces Institute.
Annalisa M BarattaDepartment of Pathology.
Shohrat ArazovDepartment of Pathology.
Zehra N Kocas-KilicarslanDepartment of Pathology.
Noah MeursBiointerfaces Institute.
Jaideep BehariPittsburgh Liver Research Center, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Edgar N TafalengDepartment of Pathology.
Jonathan FranksCenter for Biologic Imaging, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Alina OstrowskaDepartment of Pathology.
Takahiro TomiyamaDepartment of Surgery and Science, Graduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Kyohei YugawaDepartment of Surgery and Science, Graduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Akinari MorinagaDepartment of Surgery and Science, Graduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Zi WangDepartment of Statistics.
Kazuki TakeishiDepartment of Surgery and Science, Graduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Dillon C GavlockUniversity of Pittsburgh Drug Discovery Institute.
Mark MiedelUniversity of Pittsburgh Drug Discovery Institute.
D Lansing TaylorPittsburgh Liver Research Center, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Ira J FoxCenter for Transcriptional Medicine, and.
Tomoharu YoshizumiDepartment of Surgery and Science, Graduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Deepak NagrathCenter for Transcriptional Medicine, and.
Alejandro Soto-GutierrezDepartment of Pathology.

Funding

Treating AT Deficiency with Drugs that Modulate the Proteostasis NetworkP01DK096990 · NIDDK · WASHINGTON UNIVERSITY · PI FOX, IRA J. · 2012 to 2023
$18.3M
Harnessing human brain and liver microphysiological systems for testing therapeutics for metastatic melanomaU01TR002383 · NCATS · VANDERBILT UNIVERSITY · PI MURPHY, WILLIAM L., TAYLOR, D. LANSING · 2018 to 2022
$7.6M
Mini-Livers Derived from Human IPS Cells for Modeling Steatosis and TherapyR01DK099257 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI NAGRATH, DEEPAK, SOTO-GUTIERREZ, ALEJANDRO · 2014 to 2024
$3.4M
Applying a Human Liver Microphysiology System to Develop Therapeutic Strategies for Non-Alcoholic Fatty Liver Disease (NAFLD)R01DK117881 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TAYLOR, D. LANSING · 2018 to 2021
$2.7M
Cellular Biotechnology Training Program (CBTP) - Years 31-35T32GM145304 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Guizhi Zhu · 2022 to 2026
$2.6M
Human Microphysiology Systems Disease Model of Type 2 Diabetes Starting with Liver and pancreatic IsletsUG3DK119973 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TAYLOR, D. LANSING · 2018 to 2019
$2.3M
A vascularized patient-derived iPSC liver acinus microphysiology system as an innovative precision medicine platform for optimizing clinical trial design for nonalcoholic fatty liver diseaseUH3TR003289 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BEHARI, JAIDEEP, SOTO-GUTIERREZ, ALEJANDRO · 2022 to 2024
$2.3M
Implementing A QSP Platform to Predict and Test Drugs for Metabolic Associated Fatty Liver Disease Genetic Variants in an iPSC-cell Based Human Biomimetic Liver Microphysiology SystemR01DK135606 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Mark T. Miedel · 2024 to 2026
$1.9M
Human Liver Tissue & Hepatocytes Research Resource (HLTHRR)R24DK139775 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DAVID A GELLER, Satdarshan Singh Monga · 2024 to 2026
$1.4M
Opera Phenix High-Content Imaging System for Drug DiscoveryS10OD028450 · OD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI TAYLOR, D. LANSING · 2020 to 2020
$1.0M
NCATS NIH HHS U01 TR002383NCATS NIH HHS UH3 TR003289NIDDK NIH HHS P01 DK096990NIDDK NIH HHS R01 DK099257NIDDK NIH HHS R01 DK117881NIDDK NIH HHS R01 DK135606NIDDK NIH HHS R24 DK139775NIDDK NIH HHS UG3 DK119973NIGMS NIH HHS T32 GM145304NIH HHS S10 OD028450
6 · The paper itself

Abstract

Genetic variants in lipid metabolism influence the risk of developing metabolic dysfunction-associated steatotic liver disease (MASLD), cirrhosis, and end-stage liver disease (ESLD). The mechanisms by which these variants drive disease are poorly understood. Because of the PNPLA3-I148M variant's strong correlation with all stages of the MASLD spectrum and the lack of tractable therapeutic targets, we sought to understand its impact on cellular function and liver metabolism. Primary human hepatocytes (HAHs) and induced pluripotent stem cell-derived (iPSC-derived) hepatocytes (iHeps) from healthy individuals possessing the PNPLA3-I148M mutation were characterized for changes in lipid metabolism, cellular stress, and survival. Using lipidomics, metabolomics, stable isotope tracing, and flux propensity analysis, we created a comprehensive metabolic profile of the changes associated with the PNPLA3-I148M variant. Functional analysis showed that the presence of the PNPLA3-I148M variant increased endoplasmic reticulum stress, mitochondrial dysfunction, and peroxisomal β-oxidation, ultimately leading to cell death via ferroptosis. Nutritional interventions, ferroptosis-specific inhibitors, and genetic approaches modulating GPX4 activity in PNPLA3-I148M HAHs and iHeps decreased programmed cell death. Our findings indicate that therapies targeting ferroptosis in patients carrying the PNPLA3-I148M variant could affect the development of MASLD and ESLD and highlight the utility of iPSC-based models for the study of genetic contributions to hepatic disorders.

Indexed as

ApoptosisHepatocytesLipaseLipid MetabolismMembrane ProteinsPhospholipases A2, Calcium-IndependentAcyltransferasesCells, CulturedEndoplasmic Reticulum StressFatty LiverFerroptosisHumansInduced Pluripotent Stem CellsMaleMitochondriaMutationAcyltransferasesLipaseMembrane ProteinsPhospholipases A2, Calcium-IndependentPNPLA3 protein, humanCell stressFatty acid oxidationGastroenterologyHepatologyLipidomics

Identifiers

PMID41118258
PMCPMC12890524

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.