Evidence map›Paper›PMID 41116211›Full record

ReviewJournal of computational chemistry2025

A Review of Global Optimization Methods for Molecular Structures: Algorithms, Applications and Perspectives.

Jorge Alberto Sanchez Alvarez, Patrizia Calaminici

Erratum issuedAbstract readReview
In one paragraph

Review in Journal of computational chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Jorge Alberto Sanchez AlvarezChemistry Department, CINVESTAV, Mexico City, Mexico.
Patrizia CalaminiciChemistry Department, CINVESTAV, Mexico City, Mexico.ORCID https://orcid.org/0000-0001-9842-4271

Funding

SECIHTI 895512SECIHTI CBF-2025-I-2883
6 · The paper itself

Abstract

This review presents a comprehensive overview of global optimization techniques applied to the prediction of chemical structures, including molecular conformations, crystal polymorphs, and reaction pathways. These approaches typically involve a two-step process: a global search to identify candidate structures, followed by local refinement to determine the most stable configurations. Global optimization methods are commonly grouped into two categories, known as stochastic and deterministic methods, based on their exploration strategies and underlying theoretical principles. A historical perspective highlights the progression of these methods, from early foundational algorithms to more advanced and efficient modern techniques. For each category, key algorithmic frameworks are outlined, widely used software tools are discussed, and representative applications are examined, such as conformer sampling, cluster structure prediction, and surface adsorption. The review concludes by considering future directions, including the integration of accurate quantum methods, the development of flexible hybrid algorithms, and the use of quantum computing to address increasingly complex chemical problems.

Indexed as

algorithms for exploring potential energy surfacesdeterministic methodglobal optimization methodsmolecular structuresstochastic method

Identifiers

PMID41116211
PMCPMC12537999

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.