Evidence map›Paper›PMID 41115888›Full record

ArticleNature communications2025

Mitochondrial one-carbon metabolism is required for TGF-β-induced glycine synthesis and fibrotic responses.

Angelo Y Meliton, Kun Woo D Shin, Rengül Cetin-Atalay, M Volkan Atalay, Yufeng Tian, Jennifer C Houpy Szafran, Takugo Cho, Kaitlyn A Sun, Parker S Woods, Obada R Shamaa and 7 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Metabolic control of collagen synthesis.Matrix biology : journal of the International Society for Matrix Biology · 2024
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Angelo Y MelitonDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.
Kun Woo D ShinDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0009-0000-0477-153X
Rengül Cetin-AtalayDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-2408-6606
M Volkan AtalayDepartment of Information Systems and Supply Chain Management, Loyola University Chicago, Chicago, IL, USA.
Yufeng TianDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.
Jennifer C Houpy SzafranDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.
Takugo ChoDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.
Kaitlyn A SunDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.
Parker S WoodsDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.
Obada R ShamaaDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.
Bohao ChenDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-0918-5203
Nickolai O DulinDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.
Aliya N HusainDepartment of Pathology, The University of Chicago, Chicago, IL, USA.
Alexander MuirBen May Department for Cancer Research, The University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0003-3811-3054
Hardik ShahMetabolomics Platform, Comprehensive Cancer Center, The University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-8408-5686
Gökhan M MutluDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA.ORCID http://orcid.org/0000-0002-2056-612X
Robert B HamanakaDepartment of Medicine, Section of Pulmonary and Critical Care Medicine, The University of Chicago, Chicago, IL, USA. rhamanaka@bsd.uchicago.edu.ORCID http://orcid.org/0000-0002-8909-356X

Funding

Metabolic Regulation of Myofibroblast DifferentiationR01HL151680 · NHLBI · UNIVERSITY OF CHICAGO · PI HAMANAKA, ROBERT BRIAN · 2020 to 2024
$2.0M
NHLBI NIH HHS R01 HL151680U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) R01HL151680
6 · The paper itself

Abstract

TGF-β-dependent activation of lung fibroblasts is a hallmark of Idiopathic Pulmonary Fibrosis (IPF) which results in excessive collagen deposition and progressive scarring. Collagen production by lung fibroblasts is supported by de novo synthesis of glycine, the most abundant amino acid in collagen protein. SHMT2 produces glycine by transferring a one-carbon (1 C) unit from serine to tetrahydrofolate (THF), producing 5,10-methylene-THF (meTHF). meTHF is then converted back to THF in the mitochondrial 1 C pathway. It is unknown how 1 C metabolism contributes to collagen protein production and fibrosis. Here, we demonstrate that TGF-β induces the expression of mitochondrial 1 C pathway enzymes, including MTHFD2, in human lung fibroblasts. MTHFD2 was required for TGF-β-induced cellular glycine accumulation and collagen protein production in lung fibroblasts. Pharmacologic inhibition of MTHFD2 ameliorated fibrotic responses after intratracheal bleomycin instillation in vivo. Our findings suggest that mitochondrial 1 C metabolism is a therapeutic target for IPF and other fibrotic diseases.

Indexed as

CarbonGlycineIdiopathic Pulmonary FibrosisMitochondriaTransforming Growth Factor betaAminohydrolasesAnimalsBleomycinCollagenFibroblastsGlycine HydroxymethyltransferaseHumansLungMaleMethylenetetrahydrofolate Dehydrogenase (NADP)MiceAminohydrolasesBleomycinCarbonCollagenGlycineGlycine HydroxymethyltransferaseMethylenetetrahydrofolate Dehydrogenase (NADP)MTHFD2 protein, humanMultifunctional EnzymesTetrahydrofolatesTransforming Growth Factor beta

Identifiers

PMID41115888
PMCPMC12537942

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.