Evidence map›Paper›PMID 41112574›Full record

ArticleFrontiers in cellular and infection microbiology2025

Mass spectrometric profiling of microbial polysaccharides using laser desorption/ionization - time-of-flight (LDI-TOF) and liquid chromatography-mass spectrometry (LC-MS): a novel method for structural fingerprinting and derivatization.

Lucia Dadovska, Veronika Paskova, Petr Novak, Jaroslav Hrabak

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Article in Frontiers in cellular and infection microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Lucia DadovskaDepartment of Microbiology, Biomedical Center, Faculty of Medicine in Pilsen, Charles University, Pilsen, Czechia.
Veronika PaskovaDepartment of Microbiology, Biomedical Center, Faculty of Medicine in Pilsen, Charles University, Pilsen, Czechia.
Petr NovakInstitute of Microbiology, Czech Academy of Sciences, BIOCEV, Vestec, Czechia.
Jaroslav HrabakDepartment of Microbiology, Biomedical Center, Faculty of Medicine in Pilsen, Charles University, Pilsen, Czechia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Over the last two decades, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) has been introduced into the routine diagnostic practice of microbiological laboratories for the rapid taxonomic identification of bacteria and yeasts. However, a method that effectively identifies microbes directly from clinical samples using MALDI-TOF MS has not yet been found. One of the promising targets is microbial polysaccharides, which are abundant structures in bacterial and fungal cells. Their rapid and inexpensive analysis, nevertheless, is complicated. This study focused on detecting microbial polysaccharides, such as lipopolysaccharides, using MALDI-TOF MS and liquid chromatography-tandem mass spectrometry (LC-MS). We developed a method for fingerprinting polysaccharides by acid hydrolysis and enzymatic digestion. Methods: The mono- and oligosaccharides are then derivatized with a newly designed probe (vanillyl pararosaniline, the HD ligand), enabling efficient ionization without the use of the MALDI matrix. For precise analysis of polysaccharides, the hydroxyl groups can be esterified by formic acid. Results: The method was validated using several saccharides as well as Discussion: This approach opens the possibility of directly detecting microbial polysaccharides from clinical specimens. Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (LDI-TOF MS) using a specific self-ionizable ligand enables direct ionization without the need for an additional matrix, allowing for the particular detection of molecules of interest while suppressing the background signal.

Indexed as

BacteriaFungal PolysaccharidesPolysaccharidesPolysaccharides, BacterialSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationChromatography, LiquidFungiHumansLiquid Chromatography-Mass SpectrometryTandem Mass SpectrometryFungal PolysaccharidesPolysaccharidesPolysaccharides, BacterialbacteriaLC-MSMALDI-TOF MSmass spectrometrymicrobiologypolysaccharide

Identifiers

PMID41112574
PMCPMC12531147

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.