Evidence map›Paper›PMID 41112572›Full record

ArticleFrontiers in cellular and infection microbiology2025

On-tissue derivatization for mass spectrometry imaging reveals the distribution of short chain fatty acids in murine digestive tract.

Kaoru Nakagawa, Mami Okamoto, Masako Nishida, Kenta Terashima, Manami Kobayashi, Kanae Teramoto, Akiko Kubo

Abstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Isolation and identification ofFrontiers in cellular and infection microbiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Kaoru NakagawaDivision of Analutical & Measuring Instruments, Shimadzu Corporation, Kyoto, Kyoto, Japan.
Mami OkamotoDivision of Analutical & Measuring Instruments, Shimadzu Corporation, Kyoto, Kyoto, Japan.
Masako NishidaDivision of Dermatology, Department of Internal Medicine, Graduate School of Medicine, Kobe University, Kobe, Hyōgo, Japan.
Kenta TerashimaDivision of Analutical & Measuring Instruments, Shimadzu Corporation, Kyoto, Kyoto, Japan.
Manami KobayashiDivision of Analutical & Measuring Instruments, Shimadzu Corporation, Kyoto, Kyoto, Japan.
Kanae TeramotoDivision of Analutical & Measuring Instruments, Shimadzu Corporation, Kyoto, Kyoto, Japan.
Akiko KuboDivision of Dermatology, Department of Internal Medicine, Graduate School of Medicine, Kobe University, Kobe, Hyōgo, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Short-chain fatty acids (SCFAs), which are produced by microorganisms in the digestive tract of animals, play an important role in maintaining homeostasis in the host, including immune function. Different types of SCFAs are produced by different intestinal bacterial communities. However, visualizing their spatial distribution within tissue sections has been difficult. This is primarily due to the volatility of SCFAs, which makes detection challenging, even with matrix-assisted laser desorption/ionization (MALDI) mass spectrometry imaging (MSI) using an atmospheric pressure ion source. To address this issue, we minimized the volatility of SCFAs in fresh tissue sections. Then, we used N,N,N-trimethyl-2-(piperazin-1-yl)ethan-1-amine iodide (TMPA) and 1-((dimethylamino)(dimethylimino)methyl)-1H- [1,2,3]triazolo[4,5-b]pyridine-3-oxide hexafluorophosphate (HATU) to chemically derivatize the carboxylic acid into a quaternary amine. This

Indexed as

Fatty Acids, VolatileGastrointestinal TractSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationAnimalsCecumGastrointestinal MicrobiomeMiceMice, Inbred C57BLFatty Acids, VolatileHATUMALDIMSIproteotypingSCFAsshort-chain fatty acidsTMPA

Identifiers

PMID41112572
PMCPMC12531170

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.