Evidence map›Paper›PMID 41111557›Full record

ArticleJournal of biomolecular techniques : JBT2025

Comparison of Independent Analyses of Identical Image Sets Reveals Significant Analyst-to-Analyst Variability.

Thomas Pengo, Kristopher E Kubow, Angel Mancebo, Lmrg Members, David Svoboda, Richard W Cole

Abstract readComparative Study
In one paragraph

Article in Journal of biomolecular techniques : JBT, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Thomas PengoMinnesota Supercomputing Institute University of Minnesota Twin Cities MinneapolisMN.
Kristopher E KubowJames Madison University Department of Biology Light Microscopy and Imaging Facility HarrisonburgVA.
Angel ManceboMinnesota Supercomputing Institute University of Minnesota Twin Cities MinneapolisMN.
Lmrg Membershttps://abrf.org/research-groups/imaging-flow/#light-microscopy.
David SvobodaCentre for Biomedical Image Analysis Faculty of Informatics Masaryk University Brno Czechia.
Richard W ColeNew York State Department of Health Wadsworth Center AlbanyNY.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Light Microscopy Research Group, a research group with the Association of Biomolecular Resource Facilities, organized a global study where participants were given artificially generated images of various specimens with various signal-to-noise and object proximity levels. Users were tasked with segmenting the images and providing measured metrics as part of the study. Rather than ranking algorithms, our goal was to study the sources of variability of the results across participants given the same task. This study highlights that substantial variability can exist between independent analyses of identical datasets, even when the analysis problem is relatively straightforward and the analysts are experienced. These findings further support the need for data and analysis methods that follow the findable, accessible, interoperable, reusable (FAIR) principles.

Indexed as

Image Processing, Computer-AssistedMicroscopyAlgorithmsHumansSignal-To-Noise Ratiobioimage analysisimage analysisimage analysis challengeimage processinginter-analyst variationreliabilityreproducibilityvariability

Identifiers

PMID41111557
PMCPMC12530733

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.