Evidence map›Paper›PMID 41109351›Full record

ArticleThe Journal of biological chemistry2025

Decoding ultrasensitive self-assembly of the calcium-regulated Tetrahymena cytoskeletal protein Tcb2 using optical actuation.

Nithesh P Chandrasekharan, Xiangting Lei, Jerry Honts, Saad Bhamla, Scott M Coyle

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. A self-organizing single-cell morphology circuit optimizesbioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Nithesh P ChandrasekharanDepartment of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA; Integrated Program in Biochemistry Graduate Program, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Xiangting LeiSchool of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, Georgia, USA.
Jerry HontsDepartment of Biology, Drake University, Des Moines, Iowa, USA.
Saad BhamlaSchool of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, Georgia, USA.
Scott M CoyleDepartment of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA. Electronic address: smcoyle@wisc.edu.

Funding

Biophysical mechanism and synthetic engineering of optically-controlled Ca2+-powered supramolecular enginesR35GM142588 · NIGMS · UNIVERSITY OF COLORADO · PI SAAD BHAMLA · 2021 to 2026
$4.4M
NIGMS NIH HHS R35 GM142588
6 · The paper itself

Abstract

EF-hand calcium binding proteins are key macromolecular components of many unique filament systems and ultrafast contractile structures found in protists. However, our biochemical understanding of these cytoskeletal systems has been hindered by the need for assays that can controllably generate spatiotemporal calcium dynamics to probe their behavior. Here, we define the quantitative requirements for calcium-dependent self-assembly of the Tetrahymena cortical cytoskeletal protein Tetrahymena calcium binding protein 2 (Tcb2) using a microscopy-based spatiotemporally controlled optical calcium release assay. Light-driven uncaging of the photolabile calcium chelator DMNP-EDTA stimulates rapid localized self-assembly of Tcb2 into micron-scale gel-like protein networks. We quantify how the growth, size, and lifetime of Tcb2 networks is controlled by the duration and intensity of an applied calibrated calcium input. Incorporating the fluorescent calcium indicator Rhod-5N allows inference of the spatiotemporal distribution of calcium-bound Tcb2 monomers during the reaction and identifies a sharp, ultrasensitive transition to Tcb2 self-assembly. By applying this assay to mutants in Tcb2's four EF hand domains, we show that D184 is the key calcium binding site that licenses Tcb2 for self-assembly and define quantitative roles for other binding sites in tuning Tcb2's calcium-responsiveness. Our approach reveals a rich space of structures and regulation available to a single-protein system through coupling calcium-binding to ultrasensitive self-assembly, opening new paths forward to understanding other protist filament networks and contractile myonemes.

Indexed as

CalciumCalcium-Binding ProteinsCytoskeletal ProteinsProtozoan ProteinsTetrahymenaTetrahymena thermophilaCalciumCalcium-Binding ProteinsCytoskeletal ProteinsProtozoan Proteinscalciumcalcium-binding proteinscytoskeletonoptical actuationprotistsself-assembly

Identifiers

PMID41109351
PMCPMC12661445

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.