Evidence map›Paper›PMID 41108568›Full record

ArticleProtein science : a publication of the Protein Society2025

A kinetic gatekeeper: TCR-pMHC dissociation dynamics determine T cell activation efficacy.

Mingchen Yan, Jian Wang, John Z H Zhang

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. A kinetic gatekeeper: TCR-pMHC dissociation dynamics determine T cell activation efficacy.Protein science : a publication of the Protein Society · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Mingchen YanSchool of Pharmacy, Faculty of Medicine, Macau University of Science and Technology, Macau, SAR, China.
Jian WangBinary Biotechnology LTD, Shenzhen, China.
John Z H ZhangFaculty of Synthetic Biology, Shenzhen University of Advanced Technology, Shenzhen, China.ORCID 0000-0003-4612-1863

Funding

National Natural Science Foundation of China 22333006National Natural Science Foundation of China 92270001
6 · The paper itself

Abstract

T-cell receptor (TCR) engineering is central to modern immunotherapy, but predicting T-cell functional potency remains challenging, as conventional binding affinity often poorly correlates with cellular responses. Here, we demonstrate that the kinetic properties of the TCR-pMHC dissociation-profiled via steered molecular dynamics (SMD)-serve as a robust predictor of T-cell activation. While affinity-based prediction falls short, peak rupture force and total unbinding work resolve iso-affinity TCRs and correctly rank ligands across the functional spectrum, from antagonist to super-agonist. Notably, we uncover a stage-specific signaling signature: a near-perfect linear correlation between these mechanical metrics and intermediate signaling, which transitions to a strong exponential correlation with final cellular potency (EC

Indexed as

Lymphocyte ActivationMolecular Dynamics SimulationReceptors, Antigen, T-CellT-LymphocytesHumansKineticsReceptors, Antigen, T-Cellcellular potencydissociation dynamicspeak forcesteered molecular dynamicsT cell activationT‐cell receptorTCR‐pMHC

Identifiers

PMID41108568
PMCPMC12535214

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.