Evidence map›Paper›PMID 41107743›Full record

ArticleBMC plant biology2025

Genome-wide characterization of NHX gene family in Medicago sativa under abiotic stress.

Yuqi Zhang, Xinyue Ma, Hao Liu, Li Zhao, Fei He, Mingna Li, Xue Wang, Ruicai Long, Junmei Kang, Qingchuan Yang and 1 more

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yuqi Zhang *Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Xinyue Ma *Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Hao LiuInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Li ZhaoInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Fei HeInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Mingna LiInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Xue WangInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Ruicai LongInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Junmei KangInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Qingchuan YangInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Lin ChenInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China. chenlin@caas.cn.

Funding

National Natural Science Foundation of China 32371757The major demonstration project "The Open Competition" for Seed Industry Science and Technology Innovation in Inner Mongolia No. 2022JBGS0016
6 · The paper itself

Abstract

Soil salinization is one of the major abiotic stresses limiting global crop production. As key regulators of plant salt tolerance, the NHX gene family remains systematically uncharacterized in alfalfa (Medicago sativa). In this study, genome-wide analysis identified 35 NHX family genes (MsNHXs) in alfalfa, phylogenetically classified into three subfamilies. Subcellular localization prediction revealed that while six genes localized to the vacuole, the majority were distributed on plasma membranes, suggesting their primary contribution to salt tolerance through membrane-associated mechanisms. Tissue-specific expression analysis identified four genes (MsNHX7, MsNHX12, MsNHX21, and MsNHX24) with distinct tissue expression preferences. Analysis of abiotic stress responses demonstrated that MsNHX1 and MsNHX10 responded to salt, drought, and cold stress, while MsNHX1 and MsNHX19 were specifically induced by drought. cis-acting element analysis further revealed promoter enrichment in defense/stress-responsive and phytohormone-related elements, consistent with their roles in environmental adaptation. This study provides a theoretical foundation for elucidating salt tolerance mechanisms in alfalfa and supports its genetic improvement.

Indexed as

Medicago sativaMultigene FamilyPlant ProteinsStress, PhysiologicalDroughtsGene Expression Regulation, PlantGenes, PlantGenome, PlantPhylogenySalt TolerancePlant ProteinsAbiotic stressExpression analysisMedicago sativa L.MsNHX

Identifiers

PMID41107743
PMCPMC12535171

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.