Evidence map›Paper›PMID 41105770›Full record

ArticleScience advances2025

Bacterial communities co-develop with respiratory immunity early in life, linking dysbiosis to systemic monocyte signature and wheezing.

Céline Pattaroni, Matthew Macowan, Roxanne Chatzis, Giulia Iacono, Bailey Cardwell, Mindy Gore, Adnan Custovic, Michael D Shields, Ultan F Power, Jonathan Grigg and 8 more

Abstract read
In one paragraph

Article in Science advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Design, processing, and modeling for longitudinal multiomics microbiome data.Frontiers in cellular and infection microbiology · 2026
    Review
  3. Review
  4. The Early Burn Wound Microbiome, Not Donor-Site Transfer, Marks Graft Healing Outcome.Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Céline PattaroniDepartment of Immunology, School of Translational Medicine, Monash University, Melbourne, Australia.ORCID 0000-0002-9920-1181
Matthew MacowanDepartment of Immunology, School of Translational Medicine, Monash University, Melbourne, Australia.ORCID 0000-0001-7721-1349
Roxanne ChatzisDepartment of Immunology, School of Translational Medicine, Monash University, Melbourne, Australia.
Giulia IaconoDepartment of Immunology, School of Translational Medicine, Monash University, Melbourne, Australia.ORCID 0000-0002-1527-0754
Bailey CardwellDepartment of Immunology, School of Translational Medicine, Monash University, Melbourne, Australia.ORCID 0000-0003-4686-4210
Mindy GoreImperial Centre for Paediatrics and Child Health, and National Heart and Lung Institute, Imperial College, London, UK.ORCID 0000-0002-1458-1438
Adnan CustovicImperial Centre for Paediatrics and Child Health, and National Heart and Lung Institute, Imperial College, London, UK.ORCID 0000-0001-5218-7071
Michael D ShieldsWellcome-Wolfson Institute for Experimental Medicine, School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, Belfast, UK.
Ultan F PowerWellcome-Wolfson Institute for Experimental Medicine, School of Medicine, Dentistry and Biomedical Sciences, Queen's University Belfast, Belfast, UK.ORCID 0000-0003-3246-3774
Jonathan GriggCentre for Child Health, Blizard Institute, Queen Mary University of London, London, UK.ORCID 0000-0003-3109-6028
Graham RobertsHuman Development in Health School, University of Southampton Faculty of Medicine, Southampton, UK.ORCID 0000-0003-2252-1248
Peter GhazalSchool of Medicine, Systems Immunity Research Institute, Cardiff University, Cardiff, UK.
Jürgen SchwarzeCentre for Inflammation Research, Child Life and Health, The University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-6899-748X
Steve TurnerChild Health, University of Aberdeen, Aberdeen, UK.ORCID 0000-0001-8393-5060
Andrew BushImperial Centre for Paediatrics and Child Health, and National Heart and Lung Institute, Imperial College, London, UK.ORCID 0000-0001-6756-9822
Sejal SaglaniRoyal Brompton Hospital, London, UK.ORCID 0000-0001-5192-6418
Clare M LloydNational Heart & Lung Institute, Imperial College, London. UK.ORCID 0000-0001-8977-6726
Benjamin J MarslandDepartment of Immunology, School of Translational Medicine, Monash University, Melbourne, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Early microbial colonization influences respiratory disease risk, yet mechanisms remain unclear. In a prospective birth cohort of 256 infants, we profiled bacterial, fungal, and viral communities in the upper airway and assessed local immune gene expression longitudinally and systemic gene expression at 1 year. Bacterial populations, not fungal or viral, correlated most strongly with immune development during the first 3 months, coinciding with composition shifts and immune-related gene expression changes, including interferon and adaptive immunity pathways. In contrast, the mycobiome and resident viruses showed no significant coevolution with host immunity. By 1 year, infants who previously wheezed displayed an upper airway microbiota enriched in

Indexed as

BacteriaDysbiosisMicrobiotaMonocytesRespiratory SoundsFemaleHumansInfantInfant, NewbornMale

Identifiers

PMID41105770
PMCPMC12533588

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.