Evidence map›Paper›PMID 41105619›Full record

ArticlePLoS biology2025

Expansion of the functional genomics GRACE library reveals genes relevant for temperature-dependent fitness in Candida albicans.

Ci Fu, Emily H Xiong, Livia Kupczok, Linda S Archambault, Timothy R W Wang, Caitlin Holleran, Duncan Carruthers-Lay, Ting Xuan Zhuang, Sofia Marcoccia, Haoyang Zhang and 7 more

Abstract read
In one paragraph

Article in PLoS biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Defining thebioRxiv : the preprint server for biology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Ci FuDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Emily H XiongDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Livia KupczokInstitute of Chemistry and Biochemistry, Freie Universität Berlin, Berlin, Germany.
Linda S ArchambaultDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Timothy R W WangDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Caitlin HolleranDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Duncan Carruthers-LayDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Ting Xuan ZhuangDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Sofia MarcocciaDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Haoyang ZhangDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Kevin ChenDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Daniel AndersonDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Bonnie YiuDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Zhongle LiuDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Lydia HerzelInstitute of Chemistry and Biochemistry, Freie Universität Berlin, Berlin, Germany.
Nicole RobbinsDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Leah E CowenDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0001-5797-0110

Funding

Systematic Analysis of Morphogenesis, Commensalism, and Virulence in a Leading Human Fungal PathogenR01AI127375 · NIAID · UNIVERSITY OF TORONTO · PI LEAH Elizabeth Cowen · 2017 to 2026
$5.3M
NIAID NIH HHS R01 AI127375
6 · The paper itself

Abstract

A small percentage of species in the fungal kingdom can cause devastating infections in humans, with Candida albicans reigning as a leading cause of systemic disease. One of the key virulence phenotypes for pathogenic fungi is the ability to survive at host body temperature; however, a comprehensive understanding of the mechanisms that orchestrate thermal adaptation in fungi remains incomplete. In this study, we expand the largest functional genomics resource in C. albicans, reaching 71.3% coverage of the entire genome, and perform screens under six different temperatures to identify genes important for temperature-dependent fitness. We describe the function of genes involved in translation (GAR1), splicing (C1_11680C or YSF3), and cell cycle progression (C6_00110C or RHT1) in enabling fungal survival at both low and high temperatures. Through experimental evolution, we also show that C. albicans can rapidly overcome deleterious mutations and adapt to extreme temperature environments. Overall, our study highlights the transformative potential of genome-wide functional genomics to uncover critical vulnerabilities in pathogenic fungi.

Indexed as

Candida albicansGenetic FitnessGenome, FungalAlternative SplicingAntifungal AgentsFluconazoleFungal ProteinsGene Expression Regulation, FungalGene LibraryGenomicsMultigene FamilyMutationTemperatureVirulenceAntifungal AgentsFluconazoleFungal Proteins

Identifiers

PMID41105619
PMCPMC12533916

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.