Evidence map›Paper›PMID 41105309›Full record

ArticleJournal of molecular modeling2025

From nonpolar to polar: the reconstruction mechanism of electronic structure in alkane C-C bonds induced by fluorine substitution.

Chuan Wang, Ziqiu Wang, Kun Yang, Guangxi Zhang, Nayang Li

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Article in Journal of molecular modeling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

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5 authors.

Chuan WangCollege of Ecology and Environment, Inner Mongolia University, Hohhot, 010021, China. wangchuan437@imu.edu.cn.
Ziqiu WangCollege of Ecology and Environment, Inner Mongolia University, Hohhot, 010021, China.
Kun YangCollege of Ecology and Environment, Inner Mongolia University, Hohhot, 010021, China.
Guangxi ZhangCollege of Ecology and Environment, Inner Mongolia University, Hohhot, 010021, China.
Nayang LiCollege of Ecology and Environment, Inner Mongolia University, Hohhot, 010021, China.

Funding

Natural Science Foundation of Inner Mongolia Autonomous Region 2025MS02029
6 · The paper itself

Abstract

contextThe C-C bonds in alkanes are generally considered nonpolar covalent bonds, but the mechanism by which fluorine substitution affects the polarity and cleavage mode of C-C bonds in alkanes remains unclear. In this study, using 1,1,1-trifluoroethane (CH₃-CF₃) as a model, we systematically investigated the reconstruction mechanism of the electronic structure of C-C bonds induced by fluorine substitution through density functional theory calculations, combined with bond critical point (BCP) topological analysis, atomic charge calculation, and flexible scan simulation. The results demonstrate that fluorine substitution transforms the C-C bond into a polar covalent bond via a strong electron-withdrawing inductive effect, leading to the separation of positive and negative charges on the two carbon atoms and breaking the nonpolar symmetric distribution. Flexible scan simulations reveal that the C-C bond cleavage in CH₃-CH₃ follows a typical covalent bond homolysis, whereas that in CH₃-CF₃ exhibits ionic bond characteristics. This study uncovers the reconstruction mechanism of C-C bonds from nonpolar to polar induced by fluorine substitution and its disruptive impact on the bond cleavage pathway, providing a theoretical basis for understanding the structure-property relationships of complex fluoroalkanes.

methodsAll quantum chemical calculations adopted the M06-2X functional paired with the Def2-TZVP basis set. Initial molecular structures were built in GaussView, with geometry optimization performed via Gaussian 16 to obtain optimized configurations and wavefunction files. Wavefunction analyses (including BCP topology, Hirshfeld atomic charge, Mayer bond order, and spin population/density calculations) were conducted using Multiwfn.

Indexed as

Bond cleavage mechanismC–C bondChemical bond polarityElectronic spinFluorine substitution

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