Evidence map›Paper›PMID 41105141›Full record

ArticleFEMS yeast research2025

Evolutionary engineering and molecular characterization of an antimycin A-resistant Saccharomyces cerevisiae strain: the key role of pleiotropic drug resistance (PDR1).

Alican Topaloğlu, Can Holyavkin, Ömer Esen, Ogün Morkoç, Karl Persson, Cecilia Geijer, Zeynep Petek Çakar

Abstract read
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Article in FEMS yeast research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Alican TopaloğluFaculty of Science and Letters, Department of Molecular Biology and Genetics, Istanbul Technical University, Maslak, Istanbul 34469, Türkiye.ORCID 0000-0003-4221-3488
Can HolyavkinFaculty of Science and Letters, Department of Molecular Biology and Genetics, Istanbul Technical University, Maslak, Istanbul 34469, Türkiye.
Ömer EsenFaculty of Science and Letters, Department of Molecular Biology and Genetics, Istanbul Technical University, Maslak, Istanbul 34469, Türkiye.
Ogün MorkoçDr. Orhan Ocalgiray Molecular Biology, Biotechnology and Genetics Research Center (ITU - MOBGAM), Istanbul Technical University, Maslak, Istanbul 34469, Türkiye.
Karl PerssonDivision of Industrial Biotechnology, Chalmers University of Technology, 41296 Gothenburg, Sweden.ORCID 0000-0002-2173-8165
Cecilia GeijerDivision of Industrial Biotechnology, Chalmers University of Technology, 41296 Gothenburg, Sweden.ORCID 0000-0002-4158-2938
Zeynep Petek ÇakarFaculty of Science and Letters, Department of Molecular Biology and Genetics, Istanbul Technical University, Maslak, Istanbul 34469, Türkiye.ORCID 0000-0002-2278-3670

Funding

Federation of European Microbiological SocietiesIstanbul Technical University TDK-2021-43307 PI: ZResearch and Training Grantee FEMS-GO-2020-247
6 · The paper itself

Abstract

Antimycin A, an antifungal agent that inhibits mitochondrial respiration, provides a useful model for studying resistance mechanisms. Antifungal resistance is an escalating clinical concern with limited treatment options available. To understand the molecular mechanisms of antimycin A resistance, a genetically stable, antimycin A-resistant Saccharomyces cerevisiae strain was successfully developed for the first time through an evolutionary engineering strategy, based on long-term systematic application of gradually increasing antimycin A stress in repetitive batch cultures without prior chemical mutagenesis. Comparative whole genome resequencing analysis of the evolved strain ant905-9 revealed two missense mutations in PDR1 and PRP8 genes involved in pleiotropic drug resistance and RNA splicing, respectively. Using CRISPR/Cas9 genome editing tools, the identified mutations were introduced individually and together into the reference strain, and it was confirmed that the Pdr1p.M732R mutation alone confers antimycin A-resistance in S. cerevisiae. Comparative transcriptomic analysis of the reverse-engineered Pdr1p.M732R strain showed alterations in PDR (pleiotropic drug resistance), transmembrane transport, vesicular trafficking, and autophagy pathways. Our results highlight the potential key role of PDR1 in antifungal drug resistance. This study provides new insights into mitochondrial drug resistance and the adaptive potential of yeast under respiratory stress.

Indexed as

Antifungal AgentsAntimycin AATP-Binding Cassette TransportersDNA-Binding ProteinsDrug Resistance, FungalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsGene Expression ProfilingMutation, MissenseTranscription FactorsAntifungal AgentsAntimycin AATP-Binding Cassette TransportersDNA-Binding ProteinsPDR1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription Factorsadaptive laboratory evolutionantifungal drug resistanceantimycin ACRISPR/Cas9evolutionary engineeringpleiotropic drug resistance (PDR1)

Identifiers

PMID41105141
PMCPMC12570882

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.