Evidence map›Paper›PMID 41104335›Full record

ArticleFrontiers in pharmacology2025

Role of biomarker SOCS1 in peritoneal dialysis-associated peritoneal fibrosis and immune infiltration based on machine learning screening.

Xin Ma, Xiaona He, Yun Wang, Marcin Grzegorzek, Wenjie Long, Hongxi Chen, Fang Gao, Nan Mao, Xinyu Huang

Abstract read
In one paragraph

Article in Frontiers in pharmacology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xin Ma *Department of Nephrology, The First Affiliated Hospital of Chengdu Medical College, Chengdu, China.
Xiaona He *Department of Nephrology, The First Affiliated Hospital of Chengdu Medical College, Chengdu, China.
Yun Wang *Department of Nephrology, The First Affiliated Hospital of Chengdu Medical College, Chengdu, China.
Marcin GrzegorzekInstitute of Medical Informatics, University of Luebeck, Luebeck, Germany.
Wenjie LongDepartment of Nephrology, The First Affiliated Hospital of Chengdu Medical College, Chengdu, China.
Hongxi ChenDepartment of Nephrology, The First Affiliated Hospital of Chengdu Medical College, Chengdu, China.
Fang GaoDepartment of Nephrology, The First Affiliated Hospital of Chengdu Medical College, Chengdu, China.
Nan MaoDepartment of Nephrology, The First Affiliated Hospital of Chengdu Medical College, Chengdu, China.
Xinyu HuangExpandAI GmbH, Luebeck, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction/Objectives: Chronic peritoneal dialysis (PD) induces peritoneal fibrosis through bioincompatible fluid exposure and inflammation. This study aimed to identify fibrosis biomarkers via bioinformatics, assess immune cell correlations, and validate diagnostic utility in clinical/animal models. Methods: We analyzed the GSE125498 peritoneal fluid transcriptome to identify differentially expressed genes (DEGs). Functional enrichment, protein interaction networks, and pathway analyses were performed. Three machine learning algorithms screened diagnostic markers, validated by ROC curves and nomogram modeling. Immune infiltration patterns were correlated with biomarkers. Clinical validation included SOCS-1/TGF-β1 quantification in 86 PD patients' effluent and a CKD rat fibrosis model to assess SOCS-1/TGF-β/Smad pathway interactions. Results: Four hub genes (PIM2, HSH2D, MYO3B, SOCS1; AUC = 0.914) were identified as PD fibrosis biomarkers. Monocyte infiltration increased significantly in long-term PD cohorts and inversely correlated with all biomarkers. SOCS1 exhibited positive associations with CD4+/CD8+ T cells and M1 macrophages, but negative correlations with resting mast cells and monocytes. Clinically, SOCS-1 levels in PD effluent showed non-linear temporal dynamics. Rat models confirmed SOCS-1 overexpression in fibrotic peritoneum and its functional link to TGF-β/Smad signaling. Conclusion: SOCS-1 emerges as a novel biomarker for PD-related peritoneal fibrosis, with monocyte-mediated mechanisms playing a critical role. Animal studies implicate SOCS-1 in TGF-β/Smad-driven fibrogenesis. These findings provide mechanistic insights and translational tools for monitoring PD complications.

Indexed as

dialysis-associated peritoneal fibrosisimmune infiltrationmachine learningperitoneal dialysisSOCS-1

Identifiers

PMID41104335
PMCPMC12521457

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.