Evidence map›Paper›PMID 41102233›Full record

ArticleScientific reports2025

Polyphasic and comparative genomic characterization of a novel Mariniflexile species in the rhizosphere microbiome of tomato resistant to bacterial wilt.

Min-Jung Kwak, Jaehyo Park, Hyein Park, Jaekyung Yoon, Jidam Lee, Richard L Hahnke, Seon-Woo Lee, Soon-Kyeong Kwon, Ju Yeon Song, Jihyun F Kim

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Min-Jung Kwak *Division of Life Sciences, Department of Systems Biology, Institute for Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea.
Jaehyo Park *Division of Life Sciences, Department of Systems Biology, Institute for Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea.
Hyein ParkDivision of Life Sciences, Department of Systems Biology, Institute for Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea.
Jaekyung YoonDivision of Life Sciences, Department of Systems Biology, Institute for Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea.
Jidam LeeDivision of Life Sciences, Department of Systems Biology, Institute for Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea.
Richard L HahnkeLeibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, 38124, Braunschweig, Germany.
Seon-Woo LeeDepartment of Applied Biology, Dong-A University, 37 Nakdong-daero 550 beon-gil, Saha-gu, Busan, 49315, Republic of Korea.
Soon-Kyeong KwonDivision of Applied Life Science (Brain Korea 21), Gyeongsang National University, 501 Jinju-daero, Jinju, 52828, Gyeongsangnam-do, Republic of Korea.
Ju Yeon SongDivision of Life Sciences, Department of Systems Biology, Institute for Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea. songjy57@yonsei.ac.kr.
Jihyun F KimDivision of Life Sciences, Department of Systems Biology, Institute for Life Science and Biotechnology, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul, 03722, Republic of Korea. jfk1@yonsei.ac.kr.

Funding

Ministry of Agriculture, Food and Rural Affairs 918011-4Ministry of Education, South Korea NRF-2018R1A6A1A03025607Ministry of Science and ICT, South Korea NRF-2023R1A2C3004496
6 · The paper itself

Abstract

A plethora of microbes resides in the plant rhizosphere, and some play roles in host health and disease. We previously isolated a Gram-negative, aerobic, rod-shaped rhizobacterium, TRM1-10, that contributes to bacterial wilt resistance of tomato caused by Ralstonia solanacearum. In this study, we characterized TRM1-10 through physiological and biochemical analyses, complemented by whole genome sequencing and comparative genomic analyses. Phylogenetic analysis using the 16S rRNA gene and genome sequences revealed that TRM1-10 belongs to the genus Mariniflexile and represents a new lineage. TRM1-10 also exhibits noticeable differences in physiological and biochemical characteristics compared to other Mariniflexile species. Thus, based on phylogenetic affiliation and chemotaxonomic characteristics, we propose this bacterium as a novel species in the genus, Mariniflexile rhizosphaerae sp. nov. (type strain TRM1-10

Indexed as

MicrobiotaPlant DiseasesRhizosphereSolanum lycopersicumDisease ResistanceGenome, BacterialGenomicsPhylogenyRalstonia solanacearumRNA, Ribosomal, 16SSoil MicrobiologyRNA, Ribosomal, 16SComparative genomicsDisease resistanceFlavobacteriiaMetagenomeSolanaceae

Identifiers

PMID41102233
PMCPMC12533159

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