Evidence map›Paper›PMID 41100455›Full record

ArticleJCI insight2025

A multiomics analysis identifies retinol metabolism in fibroblasts as a key pathway in wound healing.

Till Wüstemann, Elizabeta Madzharova, Mateusz S Wietecha, Norbert B Ghyselinck, Marcus Höring, Gerhard Liebisch, Nicola Zamboni, Ulrich Auf dem Keller, Sabine Werner

Abstract read
In one paragraph

Article in JCI insight, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Trial
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Till WüstemannInstitute of Molecular Health Sciences, Department of Biology, ETH Zurich, Zurich, Switzerland.
Elizabeta MadzharovaDepartment of Biotechnology and Biomedicine, Technical University of Denmark, Kgs. Lyngby, Denmark.
Mateusz S WietechaInstitute of Molecular Health Sciences, Department of Biology, ETH Zurich, Zurich, Switzerland.
Norbert B GhyselinckInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Département de Génétique Fonctionnelle et Cancer, Centre National de la Recherche Scientifique (CNRS UMR7104), Institut National de la Santé et de la Recherche Médicale (INSERM U1258), Université de Strasbourg (UNISTRA), Illkirch Cedex, France.
Marcus HöringInstitute of Clinical Chemistry and Laboratory Medicine, University of Regensburg, Regensburg, Germany.
Gerhard LiebischInstitute of Clinical Chemistry and Laboratory Medicine, University of Regensburg, Regensburg, Germany.
Nicola ZamboniInstitute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland.
Ulrich Auf dem KellerDepartment of Biotechnology and Biomedicine, Technical University of Denmark, Kgs. Lyngby, Denmark.
Sabine WernerInstitute of Molecular Health Sciences, Department of Biology, ETH Zurich, Zurich, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Impaired wound healing poses a major and increasingly frequent health problem. Among the key players in the healing process are fibroblasts, but their metabolic profile in healing wounds is largely unknown. Using a combination of transcriptomics, targeted proteomics, and metabolomics, we identified retinol metabolism as a top regulated pathway in wound fibroblasts. This is functionally relevant, since even a mild retinol deficiency caused a delay in wound closure and reepithelialization, which mainly resulted from misdirected keratinocyte migration on the new granulation tissue. Quantitative proteomics identified integrin subunit α11 as a less abundant protein in wounds of mice subjected to a retinol-deficient diet. Reduced levels of this fibroblast-specific protein likely altered the granulation tissue matrix, which in turn affected reepithelialization. These results provide a comprehensive overview of the transcriptome, proteome, and metabolome of wound fibroblasts and identify retinol metabolism in fibroblasts as a key regulator of tissue repair.

Indexed as

FibroblastsVitamin AWound HealingAnimalsGranulation TissueHumansKeratinocytesMaleMetabolomicsMiceMice, Inbred C57BLMultiomicsProteomeProteomicsTranscriptomeVitamin A DeficiencyProteomeVitamin ACell biologyDermatologyMetabolismMetabolomicsProteomicsSkin

Identifiers

PMID41100455
PMCPMC12643503

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.