Evidence map›Paper›PMID 41097911›Full record

ArticleThe New phytologist2025

Adaptive sampling with Oxford Nanopore offers a simple way to improve the efficiency of plant metagenomic studies.

Joost Theo Petra Verhoeven, Aditya Sanjay Malwe, Nathan Roussel, Ida Broman Nielsen, Sarah S T Mak, Tue Kjærgaard Nielsen, Christopher James Barnes

Abstract read
In one paragraph

Article in The New phytologist, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Joost Theo Petra VerhoevenCentre for Evolutionary Hologenomics, The Globe Institute, Faculty of Health, University of Copenhagen, Oester Farimagsgade 5, Copenhagen, 1014, Denmark.ORCID https://orcid.org/0000-0002-6403-6163
Aditya Sanjay MalweCentre for Evolutionary Hologenomics, The Globe Institute, Faculty of Health, University of Copenhagen, Oester Farimagsgade 5, Copenhagen, 1014, Denmark.
Nathan RousselDepartment of Agroecology, Faculty of Technical Sciences, Aarhus University, Forsoegsvej 1, Slagelse, 4200, Denmark.ORCID https://orcid.org/0009-0007-2412-7013
Ida Broman NielsenCentre for Evolutionary Hologenomics, The Globe Institute, Faculty of Health, University of Copenhagen, Oester Farimagsgade 5, Copenhagen, 1014, Denmark.ORCID https://orcid.org/0000-0001-9074-1491
Sarah S T MakCentre for Evolutionary Hologenomics, The Globe Institute, Faculty of Health, University of Copenhagen, Oester Farimagsgade 5, Copenhagen, 1014, Denmark.ORCID https://orcid.org/0000-0003-1119-0519
Tue Kjærgaard NielsenDepartment of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Thorvaldsensvej 40, Copenhagen, 1871, Denmark.ORCID https://orcid.org/0000-0001-6610-8450
Christopher James BarnesCentre for Evolutionary Hologenomics, The Globe Institute, Faculty of Health, University of Copenhagen, Oester Farimagsgade 5, Copenhagen, 1014, Denmark.ORCID https://orcid.org/0000-0001-6800-4233

Funding

Aarhus Universitets Forskningsfond AUFF-E-2024-9-14Villum Fonden 60770
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

adaptive samplinghost depletionlong‐read sequencingmaizemetagenomicsmicrobial enrichmentnanopore sequencingplant‐microbe interactions

Identifiers

PMID41097911
PMCPMC12529027

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.