Evidence map›Paper›PMID 41095215›Full record

ArticlePlants (Basel, Switzerland)2025

Transcriptomic Insights into the Effects of Inoculation Density in

Jinqi Yan, Yu Li, Zijia Liu, Yusheng Zheng, Jixin Zou, Dongdong Li

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jinqi YanNational Key Laboratory for Tropical Crop Breeding, College of Tropical Agriculture and Forestry, Hainan University, Sanya 572025, China.
Yu LiNational Key Laboratory for Tropical Crop Breeding, College of Tropical Agriculture and Forestry, Hainan University, Sanya 572025, China.
Zijia LiuNational Key Laboratory for Tropical Crop Breeding, College of Tropical Agriculture and Forestry, Hainan University, Sanya 572025, China.
Yusheng ZhengNational Key Laboratory for Tropical Crop Breeding, College of Tropical Agriculture and Forestry, Hainan University, Sanya 572025, China.
Jixin ZouCoconut Research Institute of Chinese Academy of Tropical Agricultural Sciences (CATAS), Wenchang 571336, China.
Dongdong LiNational Key Laboratory for Tropical Crop Breeding, College of Tropical Agriculture and Forestry, Hainan University, Sanya 572025, China.ORCID 0000-0003-4006-3551

Funding

China Agriculture Research System CARS-14National Natural Science Foundation of China U23A20220 and 32260064
6 · The paper itself

Abstract

Tissue culture technology represents a promising strategy for addressing the supply constraints of Areca catechu seedlings. Significant differences in embryoid proliferation were observed between isolated (CK) and aggregated (GL) culture conditions during subculture. To elucidate the underlying mechanisms, transcriptomic analysis was performed. Growth analysis indicated that GL embryoids exhibited the highest growth rate (50.2%) between days 12 and 15, with a peak proliferation efficiency of 50.52%. KEGG analysis identified plant hormone signaling as a key pathway. ELISA quantification demonstrated consistently higher JA levels in CK embryos, peaking at 294.06 ng/g on day 15, while IAA levels were significantly elevated in GL embryos (46.42 ng/g on day 15). The transcription factor AcGIF1 was identified as a central regulator, with further experiments confirming that JA negatively regulates and IAA positively regulates its expression. This study provides critical insights into the molecular mechanisms governing embryoid proliferation in response to inoculation density.

Indexed as

AcGIF1 transcription factorAreca catechuembryoid proliferationplant hormone signalingRNA sequencing (RNA-seq)

Identifiers

PMID41095215
PMCPMC12526192

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.