Evidence map›Paper›PMID 41094015›Full record

ArticleNature biomedical engineering2026

Staple oligomers induce a stable RNA G-quadruplex structure for protein translation inhibition in therapeutics.

Yousuke Katsuda, Takuto Kamura, Tomoki Kida, Rinka Ohno, Shuhei Shiroto, Yua Hasegawa, Kaito Utsumi, Yuki Sakamoto, Shinichiro Nakamura, Taishi Nakamura and 7 more

Abstract read
In one paragraph

Article in Nature biomedical engineering, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Yousuke KatsudaDivision of Materials Science and Chemistry, Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan. katsuda2243@kumamoto-u.ac.jp.ORCID http://orcid.org/0000-0002-5586-4530
Takuto KamuraDivision of Materials Science and Chemistry, Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan.
Tomoki KidaDivision of Materials Science and Chemistry, Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan.ORCID http://orcid.org/0009-0009-4234-3160
Rinka OhnoGraduate School of Science and Technology, Hirosaki University, Aomori, Japan.
Shuhei ShirotoGraduate School of Science and Technology, Hirosaki University, Aomori, Japan.
Yua HasegawaDivision of Materials Science and Chemistry, Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan.
Kaito UtsumiGraduate School of Science and Technology, Hirosaki University, Aomori, Japan.
Yuki SakamotoFaculty of Medicine, Osaka University, Osaka, Japan.
Shinichiro NakamuraPriority Organization for Innovation and Excellence Laboratory for Data Science, Kumamoto University, Kumamoto, Japan.
Taishi NakamuraDepartment of Medical Information Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.ORCID http://orcid.org/0000-0002-1205-3252
Kenichi TsujitaDepartment of Cardiovascular Medicine, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.
Yusuke KitamuraDivision of Materials Science and Chemistry, Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan.
Yukiko KamiyaDepartment of Biomolecular Engineering, Graduate School of Engineering, Nagoya University, Nagoya, Japan.ORCID http://orcid.org/0000-0001-7582-3886
Hiroyuki AsanumaDepartment of Biomolecular Engineering, Graduate School of Engineering, Nagoya University, Nagoya, Japan.
Toshihiro IharaDivision of Materials Science and Chemistry, Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan. toshi@chem.kumamoto-u.ac.jp.ORCID http://orcid.org/0000-0001-6236-7818
Masaki HagiharaGraduate School of Science and Technology, Hirosaki University, Aomori, Japan. hagihara@hirosaki-u.ac.jp.ORCID http://orcid.org/0000-0002-2678-825X
Shin-Ichi SatoDivision of Materials Science and Chemistry, Faculty of Advanced Science and Technology, Kumamoto University, Kumamoto, Japan. ssato0222@kumamoto-u.ac.jp.ORCID http://orcid.org/0000-0003-3085-419X

Funding

Japan Agency for Medical Research and Development (AMED) JP20ak0101116Japan Agency for Medical Research and Development (AMED) JP20lm0203012Japan Agency for Medical Research and Development (AMED) JP21lm0203004Japan Agency for Medical Research and Development (AMED) JP22fk0410055Japan Agency for Medical Research and Development (AMED) JP22ym0126806Japan Agency for Medical Research and Development (AMED) JP22ym0126813Japan Agency for Medical Research and Development (AMED) JP23ak0101168Japan Agency for Medical Research and Development (AMED) JP23am0401007Japan Agency for Medical Research and Development (AMED) JP23fk0310518MEXT | Japan Society for the Promotion of Science (JSPS) 20H02769MEXT | Japan Society for the Promotion of Science (JSPS) 20H02859MEXT | Japan Society for the Promotion of Science (JSPS) 21J11197MEXT | Japan Society for the Promotion of Science (JSPS) 21K18214MEXT | Japan Society for the Promotion of Science (JSPS) 22K05326MEXT | Japan Society for the Promotion of Science (JSPS) 23H02082MEXT | Japan Society for the Promotion of Science (JSPS) 23KJ1773MEXT | Japan Society for the Promotion of Science (JSPS) JP21H05025MEXT | Japan Society for the Promotion of Science (JSPS) JP23H04067
6 · The paper itself

Abstract

Gene-silencing mechanisms using RNA interference (RNAi) and antisense oligomers have drawn attention to nucleic acid medicines. However, several challenges remain such as low in vivo stability and inadequate target selectivity. Here we report a versatile and highly selective method for suppressing gene expression with a short oligonucleotide. The oligonucleotide, a Staple oligomer, hybridizes specifically to a target mRNA and artificially induces a higher-order structure, an RNA G-quadruplex (rG4), on the mRNA. This results in the rG4 effectively suppressing the target protein's translation. The method is validated by successfully regulating translation of TPM3, MYD88 and TRPC6 mRNAs in a cell-free system and in living mammalian cells. Unlike RNAi and antisense technologies, the present technology does not require cooperation with bioprocesses, permitting the quick and easy development of fully non-natural nucleic acid-based Staple oligomers without compromising their effectiveness. In vivo application of the technology to TRPC6 mRNA helps prevent cardiac hypertrophy in thoracic aortic constriction-treated mice without detectable off-target effects. This technology provides new insights into gene therapy after RNAi and antisense technologies.

Indexed as

G-QuadruplexesOligonucleotidesProtein BiosynthesisAnimalsCardiomegalyGenetic TherapyHumansMiceRNA InterferenceRNA, MessengerOligonucleotidesRNA, Messenger

Identifiers

PMID41094015
PMCPMC13279272

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.