Evidence map›Paper›PMID 41085408›Full record

ArticleCancer research2025

KDM6 Demethylases Contribute to EWSR1::FLI1-Driven Oncogenic Reprogramming in Ewing Sarcoma.

Elisabet Figuerola-Bou, Carla Ríos-Astorch, Enrique Blanco, María Sánchez-Jiménez, Pablo Táboas, Guerau Fernández, Soledad Gómez-González, Oscar Muñoz, Pol Castellano-Escuder, Sara Perez-Jaume and 9 more

Abstract read
In one paragraph

Article in Cancer research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Elisabet Figuerola-BouPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0002-6839-9586
Carla Ríos-AstorchPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0002-5856-359X
Enrique BlancoCenter for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Barcelona, Spain.ORCID 0000-0001-6261-7370
María Sánchez-JiménezPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0003-4214-6297
Pablo TáboasPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0003-4972-677X
Guerau FernándezMolecular Genetics Department, IRSJD, Barcelona, Spain.ORCID 0000-0003-2987-9971
Soledad Gómez-GonzálezPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0002-0578-4276
Oscar MuñozPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0009-0000-9888-0242
Pol Castellano-EscuderBiomarkers and Nutritional & Food Metabolomics Research Group, Department of Nutrition, Food Science and Gastronomy, University of Barcelona, Barcelona, Spain.ORCID 0000-0001-6466-877X
Sara Perez-JaumePediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0002-9805-4810
Marta GarciaPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0002-7030-1680
Estela PradaPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0003-4611-1120
Silvia Mateo-LozanoPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0002-2365-1573
Nicolo RiggiFaculty of Biology and Medicine, Institute of Pathology, Centre Hospitalier Universitaire Vaudois, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0001-9160-1984
Alexandra AvgustinovaPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0001-6016-2931
Cinzia LavarinoPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0002-9630-3676
Luciano Di CroceCenter for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Barcelona, Spain.ORCID 0000-0003-3488-6228
Sara Sánchez-MolinaPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0002-1430-131X
Jaume MoraPediatric Cancer, Institut de Recerca Sant Joan de Déu (IRSJD), Barcelona, Spain.ORCID 0000-0002-9386-5980

Funding

Instituto de Salud Carlos III (ISCIII) PI16/00245"la Caixa" Foundation ("la Caixa") CI24-10473Ministerio de Asuntos Económicos y Transformación Digital, Gobierno de España (MINECO) PID2022-142679NB-I00Worldwide Cancer Research (WCR) 2025_038
6 · The paper itself

Abstract

Ewing sarcoma is a highly aggressive tumor arising in bones and soft tissues, driven by the fusion oncoprotein EWSR1::FLI1. This aberrant transcription factor binds to GGAA microsatellites, causing epigenetic reprogramming through the formation of active neoenhancers in a permissive cellular context. Inhibition of the oncogene remains challenging, and current efforts seek to exploit emergent epigenetic treatments targeting EWSR1::FLI1 cofactors. In Ewing sarcoma, neoenhancers are characterized by strong enrichment of the active H3K27ac mark and a concomitant lack of the repressive H3K27me3 mark. These regions are typically decorated with high levels of H3K27me3 prior to EWSR1::FLI1 activation. In this study, upon expression of EWSR1::FLI1 in human pediatric mesenchymal stem cells, considered the putative cell of origin of Ewing sarcoma, we unraveled the genome-wide redistribution of H3K27me3. Stemming from these results, we elucidated the contribution of the H3K27me3 demethylases KDM6A/UTX and KDM6B/JMJD3 in the transcriptional activity of EWSR1::FLI1-induced enhancers. KDM6A had a demethylase-independent role in recruiting BRG1 at EWSR1::FLI1-primed enhancers containing single GGAA motifs, which was critical for Ewing sarcoma tumor growth. Conversely, KDM6B demethylated H3K27me3 at specific EWSR1::FLI1-active enhancers, colocalizing with BRG1 at GGAA repeats. Loss of KDM6B impaired the growth of Ewing sarcoma tumor xenografts. These results highlight KDM6 demethylases as EWSR1::FLI1 functional partners with potential as targets for treating Ewing sarcoma. SIGNIFICANCE: KDM6A and KDM6B mediate critical mechanisms behind EWSR1::FLI1 transcriptional activation program involving demethylase-independent and dependent functions, respectively, supporting the development of therapeutic strategies targeting these demethylases in Ewing sarcoma.

Indexed as

Bone NeoplasmsHistone DemethylasesJumonji Domain-Containing Histone DemethylasesOncogene Proteins, FusionProto-Oncogene Protein c-fli-1RNA-Binding Protein EWSSarcoma, EwingAnimalsCell Line, TumorEpigenesis, GeneticGene Expression Regulation, NeoplasticHistonesHumansMiceNuclear ProteinsEWSR1-FLI1 fusion protein, humanEWSR1 protein, humanHistone DemethylasesHistonesJumonji Domain-Containing Histone DemethylasesKDM6A protein, humanNuclear ProteinsOncogene Proteins, FusionProto-Oncogene Protein c-fli-1RNA-Binding Protein EWS

Identifiers

PMID41085408
PMCPMC12616242

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.