Evidence map›Paper›PMID 41085286›Full record

ArticleMicrobiology spectrum2025

Activation dynamics and assembly of root zone soil bacterial communities in response to stress-associated phytohormones.

Sreejata Bandopadhyay, Oishi Bagchi, Ashley Shade

Abstract read
In one paragraph

Article in Microbiology spectrum, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sreejata BandopadhyayThe Plant Resilience Institute, Michigan State University, East Lansing, Michigan, USA.ORCID 0000-0002-4694-2461
Oishi BagchiThe Plant Resilience Institute, Michigan State University, East Lansing, Michigan, USA.
Ashley ShadeUniversite Claude Bernard Lyon 1, CNRS, INRAE, VetAgro Sup, Laboratoire d'Ecologie Microbienne LEM, CNRS UMR5557, INRAE UMR1418, Villeurbanne, France.ORCID 0000-0002-7189-3067

Funding

AgBioResearch, Michigan State UniversityEuropean Research Council 101087042National Science Foundation 1817377National Science Foundation 1832042U.S. Department of Agriculture 2024-67019-42477U.S. Department of Energy DE-SC0018409
6 · The paper itself

Abstract

Plants can "cry for help" to recruit supportive microbiome members during stress, but the precise signals a plant uses to activate and assemble these microorganisms remain unclear. We evaluated the activation dynamics of root zone soil bacteria in response to phytohormones produced when plants are stressed, hypothesizing that responsive taxa could support plant resilience. We conducted a mesocosm experiment using root zone soil collected from the planted fields of two crops: the annual legume common bean ( IMPORTANCE: Global food security is a pressing societal challenge that has been exacerbated by climate change and other anthropogenic stressors on the environment. Microbial bioinoculants are a promising solution for improving crop health and resilience, but ensuring their persistence and activation in the field remains a significant challenge. This study examined how dormant root-zone-associated bacteria reactivate after exposure to the plant stress hormones abscisic acid and salicylic acid. The experiment revealed that certain bacterial taxa could reactivate in response to these plant stress signals and persist for at least 2 weeks. This work advances our understanding of the potential cues for reactivating beneficial plant-associated microbes and supports the goal of developing microbial solutions for sustainable agriculture.

Indexed as

BacteriaMicrobiotaPlant Growth RegulatorsPlant RootsSoil MicrobiologyAbscisic AcidPanicumPhaseolusRNA, Ribosomal, 16SSalicylic AcidSoilStress, PhysiologicalAbscisic AcidPlant Growth RegulatorsRNA, Ribosomal, 16SSalicylic AcidSoil16S ratiosabscisic acidamplicon sequencingbefore-after-control-impact design (BACI)mesocosmplant microbiomereactivationrhizospheresalicylic acidtranscriptionally active populations

Identifiers

PMID41085286
PMCPMC12584755

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.