Evidence map›Paper›PMID 41084623›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2025

Expanding Training Data for Endoscopic Phenotyping of Eosinophilic Esophagitis.

Juming Xiong, Hou Xiong, Quan Liu, Ruining Deng, Regina N Tyree, Girish Hiremath, Yuankai Huo

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Juming XiongDepartment of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA.
Hou XiongDepartment of Physics, University of California, Santa Barbara, Santa Barbara, CA, USA.
Quan LiuDepartment of Computer Science, Vanderbilt University, Nashville, TN, USA.
Ruining DengDepartment of Computer Science, Vanderbilt University, Nashville, TN, USA.
Regina N TyreeDivision of Pediatric Gastroenterology, Hepatology, and Nutrition, Vanderbilt University Medical Center, Nashville, TN, USA.
Girish HiremathDivision of Pediatric Gastroenterology, Hepatology, and Nutrition, Vanderbilt University Medical Center, Nashville, TN, USA.
Yuankai HuoDepartment of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA.

Funding

Controlling Quality and Capturing Uncertainty in Advanced Diffusion Weighted MRIR01EB017230 · NIBIB · VANDERBILT UNIVERSITY · PI LANDMAN, BENNETT A. · 2015 to 2024
$5.1M
RESOLUTION OF GLOMERULOSCLEROSISR01DK056942 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI FOGO, AGNES B. · 2001 to 2021
$4.9M
Complementary ex vivo multimodal optical imaging and in vivo Raman spectroscopy to understand tissue dynamicsR01EB033385 · NIBIB · VANDERBILT UNIVERSITY · PI MAHADEVAN-JANSEN, ANITA, REESE, JOHN JEFFREY · 2022 to 2025
$2.6M
AI-empowered 3D Computer Vision and Image-Omics Integration for Digital Kidney HistopathologyR01DK135597 · NIDDK · VANDERBILT UNIVERSITY · PI Yuankai Huo · 2023 to 2026
$2.1M
Dual-wavelength endoscopic Raman probe for eosinophilic esophagitisR01DK132338 · NIDDK · VANDERBILT UNIVERSITY · PI MAHADEVAN-JANSEN, ANITA · 2022 to 2025
$1.7M
fMRI physiological signatures of aging and Alzheimer's DiseaseRF1MH125931 · NIMH · VANDERBILT UNIVERSITY · PI CHANG, CATHERINE ELIZABETH · 2021 to 2021
$1.1M
NIBIB NIH HHS R01 EB017230NIBIB NIH HHS R01 EB033385NIDDK NIH HHS R01 DK056942NIDDK NIH HHS R01 DK132338NIDDK NIH HHS R01 DK135597NIMH NIH HHS RF1 MH125931
6 · The paper itself

Abstract

Eosinophilic esophagitis (EoE) is a chronic esophageal disorder marked by eosinophil-dominated inflammation. Diagnosing EoE usually involves endoscopic inspection of the esophageal mucosa and obtaining esophageal biopsies for histologic confirmation. Recent advances have seen AI-assisted endoscopic imaging, guided by the EREFS system, emerge as a potential alternative to reduce reliance on invasive histological assessments. Despite these advancements, significant challenges persist due to the limited availability of data for training AI models - a common issue even in the development of AI for more prevalent diseases. This study seeks to improve the performance of deep learning-based EoE phenotype classification by augmenting our training data with a diverse set of images from online platforms, public datasets, and electronic textbooks increasing our dataset from 435 to 7050 images. We utilized the Data-efficient Image Transformer for image classification and incorporated attention map visualizations to boost interpretability. The findings show that our expanded dataset and model enhancements markedly improve diagnostic accuracy, robustness, and comprehensive analysis, enhancing patient outcomes.

Indexed as

Deep learningEndoscopyEosinophilic esophagitisImage classification

Identifiers

PMID41084623
PMCPMC12515513

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.