Evidence map›Paper›PMID 41083911›Full record

ArticleScientific reports2025

Improving STR typing for low template DNA by abasic-site-mediated semi-linear preamplification.

Qiqi Ji, Zhimin Li, Zhimin Wang, Huaguang Yu, Fan Yang, Jianhui Xie

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Qiqi JiDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, 138 Yixueyuan Road, Shanghai, 200032, China.
Zhimin LiDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, 138 Yixueyuan Road, Shanghai, 200032, China.
Zhimin WangDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, 138 Yixueyuan Road, Shanghai, 200032, China.
Huaguang YuKey Laboratory of Forensic Evidence and Science Technology, Institute of Forensic Science, Shanghai, 200042, China.
Fan YangKey Laboratory of Forensic Evidence and Science Technology, Institute of Forensic Science, Shanghai, 200042, China. fan_yang_27@163.com.
Jianhui XieDepartment of Forensic Medicine, School of Basic Medical Sciences, Fudan University, 138 Yixueyuan Road, Shanghai, 200032, China. jhxie@fudan.edu.cn.

Funding

National Key R&D Program of China 2024YFC3306703Opening Project of Shanghai Key Laboratory of Crime Scene Evidence 2023XCWZK01Shanghai Public Security Bureau Science and Technology Project 2023005
6 · The paper itself

Abstract

Although progress has been seen for low template DNA (LT-DNA) analysis in the last few years, the obtainment of full short tandem repeat (STR) profiles remains challenging in forensic genetics. Preamplification treatment could help increase the recovery of genetic information in STR typing. In this study, an efficient amplification method was investigated, which shows that the application of the abasic site in a single primer for targets could efficiently delete the primer-binding site of PCR products to achieve semi-linear amplification (abSLA PCR). Further, the position of abasic sites located at 8th to 10th from the 3' end of the primers could facilitate PCR amplification. A significant increase in the recovery of STR loci could be obtained using a 4-plex STR pre-amplification (D8S1179, D21S11, D7S820, and CSF1PO) coupled to Identifiler Plus kit in low template of genomic DNA or single cells. Altogether, the application of abSLA amplification method can facilitate conventional STR typing in LT-DNA analysis.

Indexed as

DNADNA FingerprintingMicrosatellite RepeatsDNA PrimersForensic GeneticsHumansPolymerase Chain ReactionTemplates, GeneticDNADNA PrimersAbasic siteLow-template DNASemi-linear amplificationShort tandem repeats

Identifiers

PMID41083911
PMCPMC12518798

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