Evidence map›Paper›PMID 41083907›Full record

ArticleThe EMBO journal2025

The INO80 chromatin remodeller facilitates DNA damage bypass via postreplicative gap repair.

Ronald P Wong, Mariia Likhodeeva, Karl-Peter Hopfner, Helle D Ulrich

Abstract read
In one paragraph

Article in The EMBO journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ronald P WongInstitute of Molecular Biology, Mainz, Germany.ORCID http://orcid.org/0000-0002-4652-514X
Mariia LikhodeevaGene Center, Department of Biochemistry, Ludwig Maximilians University Munich, Munich, Germany.
Karl-Peter HopfnerGene Center, Department of Biochemistry, Ludwig Maximilians University Munich, Munich, Germany.ORCID http://orcid.org/0000-0002-4528-8357
Helle D UlrichInstitute of Molecular Biology, Mainz, Germany. h.ulrich@imb-mainz.de.ORCID http://orcid.org/0000-0003-0431-2223

Funding

Deutsche Forschungsgemeinschaft (DFG) 393547839
6 · The paper itself

Abstract

Chromatin remodellers play a crucial role in transcription, replication and genome maintenance by dynamically regulating the accessibility of DNA. The INO80 complex contributes to multiple aspects of DNA repair and DNA replication stress management. It primarily facilitates nucleosome sliding and has been linked to the removal of the histone variant H2A.Z from chromatin. Our study demonstrates that the INO80 complex promotes DNA damage bypass through postreplicative daughter-strand gap repair. The complex acts downstream of PCNA ubiquitylation, enabling both Exo1-dependent gap expansion and gap filling via translesion synthesis or template switching. Importantly, its function in DNA damage bypass is independent of H2A.Z exchange and separable from its roles in DNA double-strand break repair and transcriptional regulation. Instead, it is consistent with a ruler-like activity that ensures proper nucleosome positioning around both ends of daughter-strand gaps, providing access to exonucleases and DNA polymerases involved in gap processing. These findings underscore the importance of the INO80 complex in facilitating access to damaged DNA regions for timely and effective repair.

Indexed as

Chromatin Assembly and DisassemblyDNA DamageDNA RepairDNA ReplicationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsChromatinExodeoxyribonucleasesHistonesNucleosomesProliferating Cell Nuclear AntigenUbiquitinationChromatinexodeoxyribonuclease IExodeoxyribonucleasesHistonesINO80 complex, S cerevisiaeNucleosomesProliferating Cell Nuclear AntigenSaccharomyces cerevisiae ProteinsChromatin RemodellingDaughter-Strand GapsDNA Damage BypassDNA ReplicationGenome Stability

Identifiers

PMID41083907
PMCPMC12624141

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.