Evidence map›Paper›PMID 41083434›Full record

ArticleNature communications2025

Microbial binding module employs sophisticated clustered saccharide patches to selectively adhere to mucins.

Thapakorn Jaroentomeechai, Billy Veloz, Cátia O Soares, Felix Goerdeler, Ana Sofia Grosso, Christian Büll, Rebecca L Miller, Sanae Furukawa, Irene Ginés-Alcober, Víctor Taleb and 13 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Discovery of a secretedGut microbes · 2026
    Article
  2. Article
  3. Review
  4. Review
  5. Distinct O-Linked Glycosylation Systems in Signaling and Immune Regulation.International journal of molecular sciences · 2026
    Review
  6. Article
  7. Review
  8. Frontiers in plant science · 2026
    Article
  9. Spatial N-glycan rearrangement on αNature communications · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Thapakorn Jaroentomeechai *Copenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark.
Billy Veloz *The Institute for Biocomputation and Physics of Complex Systems (BIFI); Mariano Esquillor s/n, Campus Rio Ebro, Zaragoza, Spain.ORCID http://orcid.org/0009-0002-8231-6430
Cátia O SoaresUCIBIO - Applied Molecular Biosciences Unit, Department of Chemistry, NOVA School of Science and Technology, NOVA University Lisbon, Caparica, Portugal.
Felix GoerdelerCopenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-7190-9145
Ana Sofia GrossoUCIBIO - Applied Molecular Biosciences Unit, Department of Chemistry, NOVA School of Science and Technology, NOVA University Lisbon, Caparica, Portugal.
Christian BüllCopenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0001-7785-2920
Rebecca L MillerCopenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0001-8574-1948
Sanae FurukawaCopenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark.
Irene Ginés-AlcoberThe Institute for Biocomputation and Physics of Complex Systems (BIFI); Mariano Esquillor s/n, Campus Rio Ebro, Zaragoza, Spain.
Víctor TalebThe Institute for Biocomputation and Physics of Complex Systems (BIFI); Mariano Esquillor s/n, Campus Rio Ebro, Zaragoza, Spain.
Pedro MerinoThe Institute for Biocomputation and Physics of Complex Systems (BIFI); Mariano Esquillor s/n, Campus Rio Ebro, Zaragoza, Spain.ORCID http://orcid.org/0000-0002-2202-3460
Mattia GhirardelloDepartamento de Química and Instituto de Investigación en Química de la Universidad de La Rioja (IQUR), Universidad de La Rioja, Logroño, Spain.ORCID http://orcid.org/0000-0002-2855-4801
Ismael CompañónDepartamento de Química and Instituto de Investigación en Química de la Universidad de La Rioja (IQUR), Universidad de La Rioja, Logroño, Spain.
Helena CoelhoUCIBIO - Applied Molecular Biosciences Unit, Department of Chemistry, NOVA School of Science and Technology, NOVA University Lisbon, Caparica, Portugal.ORCID http://orcid.org/0000-0003-1992-8557
Jorge S DiasUCIBIO - Applied Molecular Biosciences Unit, Department of Chemistry, NOVA School of Science and Technology, NOVA University Lisbon, Caparica, Portugal.ORCID http://orcid.org/0000-0001-9725-1882
Renaud VincentelliArchitecture et Fonction des Macromolecules Biologiques, Centre National de la Recherche Scientifique and Aix-Marseille University, Marseille, France.ORCID http://orcid.org/0000-0001-9667-0196
Bernard HenrissatDepartment of Biotechnology and Biomedicine (DTU Bioengineering), Technical University of Denmark; Søltofts Plads, Lyngby, Denmark.ORCID http://orcid.org/0000-0002-3434-8588
Hiren JoshiCopenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-8192-2829
Henrik ClausenCopenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-0915-5055
Francisco CorzanaDepartamento de Química and Instituto de Investigación en Química de la Universidad de La Rioja (IQUR), Universidad de La Rioja, Logroño, Spain.ORCID http://orcid.org/0000-0001-5597-8127
Filipa MarceloUCIBIO - Applied Molecular Biosciences Unit, Department of Chemistry, NOVA School of Science and Technology, NOVA University Lisbon, Caparica, Portugal.ORCID http://orcid.org/0000-0001-5049-8511
Ramon Hurtado-GuerreroCopenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark. rhurtado@bifi.es.ORCID http://orcid.org/0000-0002-3122-9401
Yoshiki NarimatsuCopenhagen Center for Glycomics, Departments of Cellular and Molecular Medicine, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark. yoshiki@sund.ku.dk.ORCID http://orcid.org/0000-0003-1428-5695

Funding

TRD3 NMRbox: Bayesian AnalyticsP41GM111135 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI HOCH, JEFFREY C · 2015 to 2024
$14.0M
NIGMS NIH HHS P41 GM111135Novo Nordisk Fonden (Novo Nordisk Foundation) NNF24OC0088218
6 · The paper itself

Abstract

The mucus lining wet body surfaces forms the interphase and barrier for the microbiota and resident microbiomes. Large mucin proteins densely decorated with O-glycans make up the mucus lining to entrap, feed and shape the microbiota, and repress biofilm formation and virulence. How mucins exert these effects is poorly understood and critical is how the microbiota recognize, sense, and break down mucins. Here, we provide structural molecular evidence that a small mucin-binding module designated X409 recognizes clustered saccharide patches comprised of rows of inner monosaccharides in adjacent O-glycans. These patches are unique to mucins and binding to these provides an elegant mechanism to retain adherence to mucins despite trimming of O-glycans during microbial scavenging of monosaccharides from mucins. Realization of clustered saccharide patch-binding motifs provides a hitherto overlooked scenario of contextual glycan epitopes and impetus for discovery of new classes of glycan-binding proteins.

Indexed as

MucinsPolysaccharidesBacterial AdhesionHumansMicrobiotaMonosaccharidesProtein BindingMonosaccharidesMucinsPolysaccharides

Identifiers

PMID41083434
PMCPMC12518865

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.