Evidence map›Paper›PMID 41082663›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Apusomonad rhodopsins: A new family of ultraviolet to blue light-absorbing rhodopsin channels.

Luis Javier Galindo, Shunki Takaramoto, Takashi Nagata, Andrey Rozenberg, Hiroto Takahashi, Oded Béjà, Keiichi Inoue

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Luis Javier Galindo *Institute of Water Research, University of Granada, Granada 18071, Spain.ORCID 0000-0003-3642-3200
Shunki Takaramoto *The Institute for Solid State Physics, The University of Tokyo, Kashiwa 277-8581, Japan.ORCID 0000-0002-8195-3115
Takashi Nagata *The Institute for Solid State Physics, The University of Tokyo, Kashiwa 277-8581, Japan.ORCID 0000-0001-5379-2951
Andrey Rozenberg *Faculty of Biology, Technion-Israel Institute of Technology, Haifa 3200003, Israel.ORCID 0000-0001-9534-2297
Hiroto TakahashiThe Institute for Solid State Physics, The University of Tokyo, Kashiwa 277-8581, Japan.ORCID 0009-0006-2601-172X
Oded BéjàFaculty of Biology, Technion-Israel Institute of Technology, Haifa 3200003, Israel.ORCID 0000-0001-6629-0192
Keiichi InoueThe Institute for Solid State Physics, The University of Tokyo, Kashiwa 277-8581, Japan.ORCID 0000-0002-6898-4347

Funding

European Commission (EC) 101081957Israel Science Foundation (ISF) 1207/24Israel Science Foundation (ISF) 3131/20MEXT | Japan Society for the Promotion of Science (JSPS) JP23H04404MEXT | Japan Society for the Promotion of Science (JSPS) JP23H04863MEXT | JST | Core Research for Evolutional Science and Technology (CREST) JPMJCR22N2MEXT Promotion of Development of a Joint Usage/ Research System Project: Coalition of Universities for Research Excellence Program (CURE) JPMXP1323015482Ramon y Cajal Programme RYC2022-035282-I
6 · The paper itself

Abstract

Apusomonads are sediment-dwelling bacterivorous protists that are sister to all Opisthokonta. They have been found to show a negative phototactic response to blue light, mediated by an as-yet unidentified photoreceptive system. Here, by screening available apusomonad omics data we found genes of a distinct group of microbial rhodopsins, apusomonad rhodopsins (ApuRs). ApuRs, heterologously expressed in mammalian cells, absorbed near-UV or violet light, suggesting that ApuRs could be involved in apusomonads' photoavoidance response toward short-wavelength light. Electrophysiological measurements indicate that ApuRs are anion-selective rhodopsin channels which evolved independently of the family of channelrhodopsins widespread in other unicellular eukaryotes. In ApuRs, channel opening is triggered by photoisomerization of the retinal from its all-

Indexed as

LightRhodopsinRhodopsins, MicrobialUltraviolet RaysBlue LightPhylogenyRhodopsinRhodopsins, Microbialapusomonadsoptogeneticsphotobiologyprotistsrhodopsin

Identifiers

PMID41082663
PMCPMC12557545

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.