Evidence map›Paper›PMID 41082512›Full record

ArticlePLoS biology2025

Simple scaling laws control the genetic architectures of human complex traits.

Yuval B Simons, Hakhamanesh Mostafavi, Huisheng Zhu, Courtney J Smith, Jonathan K Pritchard, Guy Sella

Abstract read
In one paragraph

Article in PLoS biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed.

  1. Article
  2. Article
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  4. Genetic architectures of brain-related traits are shaped by strong selective constraints.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
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  10. Evolution of quantitative traits with background selection.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  11. Article
  12. Principled measures and estimates of trait polygenicity.American journal of human genetics · 2026
    Article
  13. Article
  14. Article
  15. Background selection in recombining genomes and its consequences for the maintenance of variation in complex traits.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  16. Parameterizing the genetic architecture under stabilizing selection.bioRxiv : the preprint server for biology · 2026
    Article
  17. Article
  18. Quantitative system drift.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yuval B SimonsSection of Genetic Medicine, University of Chicago, Chicago, Illinois, United States of America.ORCID 0000-0002-0037-4673
Hakhamanesh MostafaviDepartment of Genetics, Stanford University, Stanford, California, United States of America.
Huisheng ZhuDepartment of Biology, Stanford University, Stanford, California, United States of America.
Courtney J SmithDepartment of Genetics, Stanford University, Stanford, California, United States of America.
Jonathan K PritchardDepartment of Genetics, Stanford University, Stanford, California, United States of America.
Guy SellaDepartment of Biological Sciences, Columbia University, New York, New York, United States of America.

Funding

Integration of genetic association mapping and functional data to elucidate genetic mechanisms of diseaseR01HG008140 · NHGRI · STANFORD UNIVERSITY · PI JONATHAN K PRITCHARD · 2016 to 2026
$7.3M
New methods for constructing and evaluating polygenic scoresR01HG011432 · NHGRI · STANFORD UNIVERSITY · PI PRITCHARD, JONATHAN K · 2020 to 2023
$3.3M
The population genetics of disease risk and other quantitative traitsR01GM115889 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI SELLA, GUY · 2015 to 2025
$2.9M
Understanding the "flattening" of gene contributions to human complex trait habitabilityF32HG011202 · NHGRI · STANFORD UNIVERSITY · PI SIMONS, YUVAL B · 2020 to 2022
$206k
NIH HHS F32HG011202NIH HHS R01GM115889NIH HHS R01 HG008140NIH HHS R01HG011432
6 · The paper itself

Abstract

Genome-wide association studies have revealed that the genetic architectures of complex traits vary widely, including in terms of the numbers, effect sizes, and allele frequencies of significant hits. However, at present we lack a principled way of understanding the similarities and differences among traits. Here, we describe a probabilistic model that combines the effects of mutation, drift, and stabilizing selection at individual sites with a genome-scale model of phenotypic variation. In this model, the architecture of a trait arises from the distribution of selection coefficients of mutations and from two scaling parameters. We fit this model for 95 highly polygenic quantitative traits of different kinds from the UK Biobank. Notably, we infer that all these traits have fairly similar, though not identical, distributions of selection coefficients. This similarity suggests that differences in architectures of highly polygenic traits arise mainly from the two scaling parameters: the mutational target size and heritability per site, which vary by orders of magnitude among traits. When these two scale factors are accounted for, we find that the architectures of all 95 traits are very similar.

Indexed as

Models, GeneticMultifactorial InheritanceQuantitative Trait, HeritableGene FrequencyGenetic DriftGenome-Wide Association StudyHumansMutationPhenotypeQuantitative Trait LociSelection, Genetic

Identifiers

PMID41082512
PMCPMC12517483

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.