Evidence map›Paper›PMID 41080960›Full record

ArticleFrontiers in medicine2025

TACI and BTK gene analysis in predominantly antibody deficiencies among the primary immunodeficiency disorder patients in Bangladesh.

Tripty Chakrobortty, Chandan Kumar Roy, Mohammad Imnul Islam, Ismet Niger, Kamrul Laila, Avizit Sarker, Nusrat Akhtar Juyee, Md Mydul Islam, Fahmida Hoque, Partho Protim Chakrobortty and 2 more

Abstract read
In one paragraph

Article in Frontiers in medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Tripty ChakroborttyDepartment of Microbiology, Jashore Medical College, Jashore, Bangladesh.
Chandan Kumar RoyDepartment of Microbiology and Immunology, Bangabandhu Sheikh Mujib Medical University, Shahbag, Dhaka, Bangladesh.
Mohammad Imnul IslamDepartment of Paediatrics, Bangabandhu Sheikh Mujib Medical University, Shahbag, Dhaka, Bangladesh.
Ismet NigerDepartment of Microbiology and Immunology, Bangabandhu Sheikh Mujib Medical University, Shahbag, Dhaka, Bangladesh.
Kamrul LailaDepartment of Paediatrics, Bangabandhu Sheikh Mujib Medical University, Shahbag, Dhaka, Bangladesh.
Avizit SarkerDepartment of Microbiology, Dhaka Medical College, Dhaka, Bangladesh.
Nusrat Akhtar JuyeeDepartment of Microbiology, Comilla Medical College, Cumilla, Bangladesh.
Md Mydul IslamDepartment of Microbiology and Immunology, Bangabandhu Sheikh Mujib Medical University, Shahbag, Dhaka, Bangladesh.
Fahmida HoqueDepartment of Microbiology, Jamalpur Medical College, Jamalpur, Bangladesh.
Partho Protim ChakroborttyDepartment of Surgery, Magura 250-bed General Hospital, Magura, Bangladesh.
S M Ali AhmedDepartment of Microbiology and Immunology, Bangabandhu Sheikh Mujib Medical University, Shahbag, Dhaka, Bangladesh.
Abu Naser Ibne SattarDepartment of Microbiology and Immunology, Bangabandhu Sheikh Mujib Medical University, Shahbag, Dhaka, Bangladesh.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Common variable immune deficiency disorder (CVID) and X-linked agammaglobulinemia (XLA) are the most prevalent predominantly antibody deficiencies (PADs). Analysis of the TACI/TNFRSF13B gene in CVID and BTK genes in XLA patients using Sanger sequencing can help make specific diagnoses of these cases. The study aimed to find the TACI and BTK gene mutations and their allelic variations associated with CVID and XLA patients. Methods: This cross-sectional study was conducted on clinically suspected PAD patients who attended the Department of Pediatrics, Bangabandhu Sheikh Mujib Medical University (BSMMU), Bangladesh, from September 2022 to August 2023. Serum immunoglobulin levels, immunophenotyping by flow cytometry, and PCR were conducted in the Department of Microbiology and Immunology at BSMMU. Genetic analysis of the TACI and BTK genes was conducted using Sanger sequencing at DNA Solutions Limited, Dhaka, Bangladesh. The sequencing results were validated using the NCBI GenBank. Results: Of 35 clinically suspected PAD patients, 15 (42.86%) were diagnosed as PAD patients. Within this group, seven (46.67%) were diagnosed with CVID, seven (46.67%) with XLA, and one (6.66%) with agammaglobulinemia other than XLA. The analysis of the TACI gene revealed no pathogenic variants in the CVID patients. Upon analyzing exons 2 to 19 of the BTK gene, seven pathogenic/likely pathogenic mutations were detected, consisting of four nonsense and three missense mutations. Among these, three were found to be novel mutations, including two missense and one nonsense mutation. Conclusion: The genetic analysis of the TACI gene in CVID patients revealed no pathogenic variants. The BTK gene displayed heterogeneous mutations, with nonsense mutations being the most prevalent. In this cohort, XLA patients presented three

Indexed as

BtkPADPIDDssanger sequencingTACI/TNFRSF13B

Identifiers

PMID41080960
PMCPMC12507743

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.