Evidence map›Paper›PMID 41079707›Full record

ArticleHardwareX2025

PowderBot: An automated device for decision-making in crop breeding programs based on DNA extraction from seed powder.

H Díaz, E Macea, R Escobar, S Beebe, J Tohme, B Raatz

Abstract read
In one paragraph

Article in HardwareX, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

H DíazThe Alliance of Bioversity International and CIAT, Km 17 Recta Cali-Palmira, Apartado Aereo 7613, Cali, 763537, Colombia.
E MaceaThe Alliance of Bioversity International and CIAT, Km 17 Recta Cali-Palmira, Apartado Aereo 7613, Cali, 763537, Colombia.
R EscobarThe Alliance of Bioversity International and CIAT, Km 17 Recta Cali-Palmira, Apartado Aereo 7613, Cali, 763537, Colombia.
S BeebeThe Alliance of Bioversity International and CIAT, Km 17 Recta Cali-Palmira, Apartado Aereo 7613, Cali, 763537, Colombia.
J TohmeThe Alliance of Bioversity International and CIAT, Km 17 Recta Cali-Palmira, Apartado Aereo 7613, Cali, 763537, Colombia.
B RaatzThe Alliance of Bioversity International and CIAT, Km 17 Recta Cali-Palmira, Apartado Aereo 7613, Cali, 763537, Colombia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This paper presents the design, construction, operation, and evaluation of PowderBot, a purpose-built, open-source, low-cost machine (∼US$ 5000) that automates DNA extraction from ungerminated seeds. The device drills into the seed cotyledon, where the genetic information of the prospective plant is stored. It then transfers the pure, powdered samples directly to well-plates for analysis. This reduces time and other research resources and can accelerate crop varietal improvement, ultimately contributing to more efficient and successful crop breeding programs. At CIAT́s campus, we have validated the method for obtaining seed-tissue material from common beans for DNA extraction and subsequently genotyping agronomically interesting lines, using the bc-3 molecular marker. Three genotyping trials were carried out using this method, which generated consistent results, regardless of the number of perforations made to the seed. This leads us to infer that the method works effectively and can be applied for marker assisted selection (MAS) in bean and other crop breeding programs. Finally, germination and vigor tests indicated the sampling process did not significantly compromise perforated seed germination rate, physiological quality or viability.

Indexed as

DNA analysisGenotypingMechatronicsPlant breeding

Identifiers

PMID41079707
PMCPMC12510228

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.