Evidence map›Paper›PMID 41070399›Full record

ArticleACS synthetic biology2025

Construction and Diversification of Natural Product Biosynthetic Gene Clusters at High Efficiency and Accuracy.

Chaoxian Bai, Lina M Bayona, Gilles P van Wezel

Abstract read
In one paragraph

Article in ACS synthetic biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Chaoxian BaiInstitute of Biology, Leiden University, Sylviusweg 72, 2333 BE Leiden, Netherlands.
Lina M BayonaInstitute of Biology, Leiden University, Sylviusweg 72, 2333 BE Leiden, Netherlands.
Gilles P van WezelInstitute of Biology, Leiden University, Sylviusweg 72, 2333 BE Leiden, Netherlands.ORCID 0000-0003-0341-1561

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biosynthetic gene clusters (BGCs) encode the biosynthesis of natural products, which serve as the foundation for therapeutics such as antibiotics, anticancer agents, antifungals, and immunosuppressants. The vast majority of the BGCs remain uncharacterized due to lack of expression or inability to cultivate the native host, making refactoring and expression of BGCs in optimized hosts a prerequisite for genome-based drug discovery. Transformation-associated recombination (TAR) cloning and Gibson assembly are error prone due to the use of homologous recombination. Here, we present a BGC cloning and refactoring strategy based on a hierarchical Golden Gate Assembly (GGA), which enables systematic pathway engineering and mutagenesis with unprecedented accuracy and efficiency. We constructed the 23 kb actinorhodin (ACT) BGC and 23 mutant derivatives with either one of the

Indexed as

Biological ProductsBiosynthetic PathwaysMultigene FamilyStreptomyces coelicolorAnthraquinonesBenzoisochromanequinonesCloning, MolecularMetabolic EngineeringSynthetic BiologyactinorhodinAnthraquinonesBenzoisochromanequinonesBiological Productsactinorhodinbiosynthetic gene clusterGolden Gate Assemblynatural product biosynthesisStreptomycessynthetic biology

Identifiers

PMID41070399
PMCPMC12645565

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.