Evidence map›Paper›PMID 41069852›Full record

ArticleiScience2025

The inbred newt genome unveils molecular mechanisms of behavior, development, and regeneration in urodele amphibians.

Yuki Kimura, Miyuki Suzuki, Akinori Okumura, Masatoshi Matsunami, Hiroyo Nishide, Rima Mizuno, Kazuto Bou, Yoshinobu Uno, Tomoaki Nakada, Itaru Hasunuma and 20 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in iScience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Yuki KimuraSchool of Life Science and Technology, Institute of Science Tokyo, Meguro-ku, Tokyo 152-8550, Japan.
Miyuki SuzukiDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Akinori OkumuraTrans-Scale Biology Center, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Masatoshi MatsunamiGraduate School of Medicine, University of the Ryukyus, Ginowan, Okinawa 901-2720, Japan.
Hiroyo NishideTrans-Scale Biology Center, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Rima MizunoDepartment of Basic Biology, The Graduate University for Advanced Studies, SOKENDAI, Okazaki, Aichi 444-8585, Japan.
Kazuto BouDepartment of Basic Biology, The Graduate University for Advanced Studies, SOKENDAI, Okazaki, Aichi 444-8585, Japan.
Yoshinobu UnoDepartment of Natural Science, Graduate School of Technology, Industrial and Social Science, Tokushima University, Tokushima 770-8506, Japan.
Tomoaki NakadaDepartment of Veterinary Medicine, Nippon Veterinary and Life Science University, Musashino, Tokyo 180-8602, Japan.
Itaru HasunumaDepartment of Biology, Faculty of Science, Toho University, Funabashi, Chiba 274-8510, Japan.
Yoshikazu HaramotoDepartment of Agri-Production Sciences, College of Agriculture, Tamagawa University, Machida, Tokyo 194-8610, Japan.
Akimasa FukuiFaculty of Science and Engineering, Chuo University, Bunkyo-ku, Tokyo 112-8551, Japan.
Takeshi InoueFaculty of Medicine, Tottori University, Yonago, Tottori 683-8503, Japan.
Yuki SatoDepartment of Anatomy, Faculty of Medicine, Kansai Medical University, Hirakata, Osaka 573-1010, Japan.
Katsushi YamaguchiTrans-Scale Biology Center, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Zicong ZhangInstitute for the Advanced Study of Human Biology, Kyoto University, Sakyo-ku, Kyoto 606-8501, Japan.
Akane ChiharaTrans-Scale Biology Center, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Mai TakeharaGraduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, Hiroshima 739-8526, Japan.
Yuki ShibataDepartment of Biology, Nippon Medical School, Musashino, Tokyo 180-0023, Japan.
Masaaki KitadaDepartment of Anatomy, Faculty of Medicine, Kansai Medical University, Hirakata, Osaka 573-1010, Japan.
Nerea MorenoDepartment of Cell Biology, Faculty of Biological Sciences, Complutense University, 28040 Madrid, Spain.
Ikuo UchiyamaTrans-Scale Biology Center, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Yutaka SuzukiGraduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-0882, Japan.
Takashi TakeuchiFaculty of Medicine, Tottori University, Yonago, Tottori 683-8503, Japan.
Masato NikaidoSchool of Life Science and Technology, Institute of Science Tokyo, Meguro-ku, Tokyo 152-8550, Japan.
Kiyokazu AgataProfessor Emeritus, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Atsushi ToyodaComparative Genomics Laboratory, National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan.
Shuji ShigenobuTrans-Scale Biology Center, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Toshinori HayashiGraduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, Hiroshima 739-8526, Japan.
Ken-Ichi T SuzukiTrans-Scale Biology Center, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salamanders provide excellent models for studying vertebrate evolution, development, and regeneration. To further advance the newt as a model organism in biology, we conducted draft genome sequencing of 20 Gb of an inbred newt (

Indexed as

Evolutionary biologyPhylogeneticsPhylogenyZoology

Identifiers

PMID41069852
PMCPMC12506533

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.