Evidence map›Paper›PMID 41069301›Full record

ArticleThe journal of physical chemistry letters2025

Density Functional Theory Calculations to Investigate the Role Played by an Aspartate Dyad in Hsp60-Catalyzed ATP Hydrolysis.

Luca Torielli, Federica Guarra, Stefano A Serapian, Giorgio Colombo

Abstract read
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Article in The journal of physical chemistry letters, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Luca TorielliDepartment of Chemistry, University of Pavia, via Taramelli 12, 27100 Pavia, Italy.ORCID 0000-0001-7655-2037
Federica GuarraDepartment of Chemistry, University of Pavia, via Taramelli 12, 27100 Pavia, Italy.ORCID 0000-0002-7301-3000
Stefano A SerapianDepartment of Chemistry, University of Pavia, via Taramelli 12, 27100 Pavia, Italy.ORCID 0000-0003-0122-8499
Giorgio ColomboDepartment of Chemistry, University of Pavia, via Taramelli 12, 27100 Pavia, Italy.ORCID 0000-0002-1318-668X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adenosine 5'-triphosphate (ATP) hydrolysis is one of the most significant reactions in biochemistry. In chaperone proteins, energy released by hydrolysis enables them to carry out their function and help other proteins (called "clients") to fold into their functional form. Here, we run Density Functional Theory calculations on three cluster models of the Hsp60 active site extracted from our previous molecular dynamics simulations of the 14-meric Hsp60 double-ring complex: our aim is to qualitatively investigate the mechanisms of ATP hydrolysis in different scenarios where the chaperone closes a dyad composed of catalytic aspartates Asp50 and Asp397. Since dyad closure raises Asp p

Indexed as

Adenosine TriphosphateAspartic AcidChaperonin 60Density Functional TheoryBiocatalysisCatalytic DomainHydrolysisMolecular Dynamics SimulationAdenosine TriphosphateAspartic AcidChaperonin 60

Identifiers

PMID41069301
PMCPMC12557358

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.