Evidence map›Paper›PMID 41066420›Full record

ArticlePloS one2025

A study of RNA splicing and protein expression in the living human brain.

Brian H Kopell, Deepak A Kaji, Lora E Liharska, Eric Vornholt, Anina Lund, Alice Hashemi, Ryan C Thompson, Jessica S Johnson, Nicole Bussola, Esther Cheng and 26 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors.

Brian H KopellIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Deepak A KajiIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Lora E LiharskaIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Eric VornholtIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Anina LundIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Alice HashemiIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Ryan C ThompsonIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.ORCID https://orcid.org/0000-0002-0450-8181
Jessica S JohnsonIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Nicole BussolaIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Esther ChengIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
You Jeong ParkIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Punit ShahBPGbio, Waltham, Massachusetts, United States of America.
Weiping MaIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Richard SearfossBPGbio, Waltham, Massachusetts, United States of America.
Gregory M MillerBPGbio, Waltham, Massachusetts, United States of America.
Nischal Mahaveer ChandBPGbio, Waltham, Massachusetts, United States of America.
Jack HumphreyIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Lillian WilkinsIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Kimia ZiafatIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.ORCID https://orcid.org/0000-0003-2988-1203
Hannah SilkIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Lisa M LinaresIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Brendan SullivanIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Claudia FengIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Vanessa CohenIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Prashant KotaIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Emily MoyaIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.ORCID https://orcid.org/0000-0002-9097-9050
Marysia-Kolbe RiederIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Girish N NadkarniIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Michael S BreenIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Joseph ScarpaIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Niven R NarainBPGbio, Waltham, Massachusetts, United States of America.
Pei WangIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Michael A KiebishBPGbio, Waltham, Massachusetts, United States of America.
Eric E SchadtIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Noam D BeckmannIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.
Alexander W CharneyIcahn School of Medicine at Mount Sinai, New York, New York, United States of America.ORCID https://orcid.org/0000-0001-8135-6858

Funding

Training Program in NeuroscienceT32MH087004 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI GEORGE W. HUNTLEY · 2009 to 2026
$4.0M
Training the Next Generation of Psychiatrists-Scientists for Translational ResearchR25MH129256 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ANTONIA S NEW, Maria De Las Mercedes Perez Rodriguez · 2023 to 2026
$831k
NIMH NIH HHS R25 MH129256NIMH NIH HHS T32 MH087004
6 · The paper itself

Abstract

Due to the unavailability of living human brain tissue for molecular research, postmortem brain samples are currently the standard tissue source for molecular studies of the human brain. The Living Brain Project (LBP) was designed to test the assumption that the postmortem brain is an accurate molecular representation of in the living brain on multiple levels of molecular biology. Findings from previous LBP reports suggest that this assumption does not hold with respect to RNA transcript expression levels. Here, molecular differences between living and postmortem human prefrontal cortex tissues obtained for the LBP are corroborated through analyses of RNA splicing and protein expression data. Significant differences were observed with respect to (1) the expression of most primary RNA transcripts, mature RNA transcripts, and proteins, (2) the splicing of most primary RNA transcripts into mature RNA transcripts, and (3) the patterns of co-expression between RNA transcripts and proteins. Taken together, this report corroborates the presence of widespread molecular differences between living and postmortem human brain tissues. These observations should be considered when designing and interpreting studies of human brain biology.

Indexed as

BrainPrefrontal CortexRNA SplicingFemaleHumansMaleRNA, MessengerRNA, Messenger

Identifiers

PMID41066420
PMCPMC12510584

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.