Evidence map›Paper›PMID 41065666›Full record

ArticleThe ISME journal2025

Exceptionally high carbon fixation and nitrogen assimilation rates in microbial mats of an alkaline soda lake.

Yihua Liu, Alyse K Kiesser, Agasteswar Vadlamani, Angela Kouris, Marc Strous

Abstract read
In one paragraph

Article in The ISME journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yihua LiuDepartment of Earth, Energy, and Environment, University of Calgary, 750 Campus Drive NW, Calgary, AB T2N 1N4, Canada.ORCID 0000-0001-5276-3753
Alyse K KiesserSchool of Engineering, University of British Columbia Okanagan, 1137 Alumni Ave, Kelowna, BC V6T 1Z4, Canada.ORCID 0000-0002-3516-4043
Agasteswar VadlamaniDepartment of Earth, Energy, and Environment, University of Calgary, 750 Campus Drive NW, Calgary, AB T2N 1N4, Canada.
Angela KourisDepartment of Earth, Energy, and Environment, University of Calgary, 750 Campus Drive NW, Calgary, AB T2N 1N4, Canada.
Marc StrousDepartment of Earth, Energy, and Environment, University of Calgary, 750 Campus Drive NW, Calgary, AB T2N 1N4, Canada.ORCID 0000-0001-9600-3828

Funding

Canada First Research Excellence FundCanada Foundation for InnovationCanada Research Chair CRC-2020-00257Digital Research Alliance of CanadaGovernment of AlbertaNatural Sciences and Engineering Research CouncilUniversity of Calgary
6 · The paper itself

Abstract

Alkaline soda lakes, characterized by high pH and high concentrations of sodium and dissolved carbonates, support diverse alkaliphilic microbial communities. Using stable isotope probing with 13C-bicarbonate, 15N-ammonium, 15N-nitrate, and 15N-urea, we measured assimilation rates for carbon and nitrogen by microbial mats of alkaline Goodenough Lake, Canada. Our results showed extremely high carbon fixation rates averaging 24 g C/m2/day, equalling or exceeding rates measured fifty years ago in African alkaline soda lakes. Urea consumption occurred both during the day and during the night, but assimilation mainly occurred during the day. Ammonium assimilation was stable between day and night. Apparently, cyanobacteria preferred urea as a nitrogen source, whereas heterotrophs preferred ammonium. Two different cyanobacteria dominated the microbial mats, Nodosilinea and Sodalinema. Using Orbitrap mass spectrometry, we only observed assimilation of 13C bicarbonate by Sodalinema, but not by Nodosilinea. The latter might focus on different carbon sources, such as urea. Strong negative correlation between their abundances in proteomes also supported niche partitioning between these two cyanobacteria.

Indexed as

Carbon CycleCyanobacteriaLakesNitrogenCanadaCarbonCarbon IsotopesHydrogen-Ion ConcentrationNitrogen IsotopesUreaCarbonCarbon IsotopesNitrogenNitrogen IsotopesUreaCalis-pcarbon stable isotope probingcyanobacterianitrogen assimilationnitrogen stable isotope probingprimary productivityprotein-SIPproteomicsurea

Identifiers

PMID41065666
PMCPMC12598745

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.