Evidence map›Paper›PMID 41064112›Full record

ArticleBioinformatics advances2025

A Kolmogorov metric embedding for live cell microscopy signaling patterns.

Layton Aho, Mark Winter, Marc DeCarlo, Agne Frismantiene, Yannick Blum, Paolo Armando Gagliardi, Olivier Pertz, Andrew R Cohen

Abstract read
In one paragraph

Article in Bioinformatics advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Layton AhoDepartment of Electrical and Computer Engineering, Drexel University, Philadelphia, PA 19104, United States.
Mark WinterDepartment of Electrical and Computer Engineering, Drexel University, Philadelphia, PA 19104, United States.
Marc DeCarloDepartment of Electrical and Computer Engineering, Drexel University, Philadelphia, PA 19104, United States.
Agne FrismantieneInstitute of Cell Biology, University of Bern, 3012 Bern, Switzerland.
Yannick BlumInstitute of Cell Biology, University of Bern, 3012 Bern, Switzerland.
Paolo Armando GagliardiInstitute of Cell Biology, University of Bern, 3012 Bern, Switzerland.
Olivier PertzInstitute of Cell Biology, University of Bern, 3012 Bern, Switzerland.
Andrew R CohenDepartment of Electrical and Computer Engineering, Drexel University, Philadelphia, PA 19104, United States.ORCID https://orcid.org/0000-0002-7707-5970

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Summary: We present a metric embedding that captures spatiotemporal patterns of cell signaling dynamics in 5D ( Availability and implementation: All of the software, including the phantom data generation and analysis, is available free and open-source, as described in the 'Data Availability' section.

Identifiers

PMID41064112
PMCPMC12502908

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.