Evidence map›Paper›PMID 41060905›Full record

ArticlePloS one2025

Captivity-driven microbiota reshaping: A cross-species analysis of divergent patterns in the gut microbiota of giant pandas (Ailuropoda melanoleuca), red pandas (Ailurus fulgens), and Asiatic black bears (Ursus thibetanus).

Lin Xu, Zhengquan Hu, Xin Zhang, Siyuan Zhang, Wenjing Li, Minglei Wang, Ruihong Ning, Wei Guo

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Lin XuChina Conservation and Research Center for the Giant Panda, Key Laboratory of State Forestry and Grassland Administration on the Giant Panda, Chengdu, China.
Zhengquan HuChina Conservation and Research Center for the Giant Panda, Key Laboratory of State Forestry and Grassland Administration on the Giant Panda, Chengdu, China.
Xin ZhangChina Conservation and Research Center for the Giant Panda, Key Laboratory of State Forestry and Grassland Administration on the Giant Panda, Chengdu, China.
Siyuan ZhangSichuan Provincial Engineering Laboratory for Prevention and Control Technology of Veterinary Drug Residue in Animal-Origin Food, Chengdu Medical College, Chengdu, China.
Wenjing LiSichuan Wolong National Nature Reserve Administration, Wolong, Sichuan Province, China.
Minglei WangChina Conservation and Research Center for the Giant Panda, Key Laboratory of State Forestry and Grassland Administration on the Giant Panda, Chengdu, China.
Ruihong NingSichuan Provincial Engineering Laboratory for Prevention and Control Technology of Veterinary Drug Residue in Animal-Origin Food, Chengdu Medical College, Chengdu, China.
Wei GuoSichuan Provincial Engineering Laboratory for Prevention and Control Technology of Veterinary Drug Residue in Animal-Origin Food, Chengdu Medical College, Chengdu, China.ORCID https://orcid.org/0000-0002-1410-2361

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The relative influence of diet, host phylogeny, and environment on animal gut microbiota remains unresolved, particularly for endangered ursids lacking quantitative data. Here, we systematically evaluated the drivers of gut microbial assembly in captive versus wild giant pandas (Ailuropoda melanoleuca), red pandas (Ailurus fulgens), and Asiatic black bears (Ursus thibetanus) using 16S rRNA V4 sequencing. Compared with wild cohorts, captive giant pandas exhibited significantly reduced α-diversity (P < 0.05), whereas captive red pandas and black bears showed significant increases (P < 0.05). Weighted UniFrac-based β-diversity analysis revealed that intra-species distances between captive and wild individuals exceeded those observed between species within either habitat (P < 0.001), indicating profound community restructuring under captivity. At the phylum level, captive animals were dominated by Firmicutes (68.6 ± 23.0%), in contrast to Proteobacteria dominance in wild populations (81.2 ± 17.6%). Genus-level shifts included an enrichment of Sarcina in captive bears and Streptococcus and Escherichia-Shigella in captive pandas, whereas wild bears and pandas were predominantly enriched in Burkholderia and Pseudomonas, respectively. PERMANOVA attributed 21.6% of community variance to environment (F = 23.62), compared to 12.3% for host phylogeny (F = 6.75) and 3.9% for diet (F = 4.32). These findings demonstrate that captive management is the primary determinant of gut microbiota divergence in giant pandas, red pandas, and Asiatic black bear provide microbiome-based guidance for improving captive husbandry and reintroduction success.

Indexed as

AiluridaeGastrointestinal MicrobiomeUrsidaeAnimalsBacteriaPhylogenyRNA, Ribosomal, 16SSpecies SpecificityRNA, Ribosomal, 16S

Identifiers

PMID41060905
PMCPMC12507224

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