Evidence map›Paper›PMID 41060040›Full record

ArticleJMIR medical informatics2025

Taxonomy Portraits: Deciphering the Hierarchical Relationships of Medical Large Language Models.

Radha Nagarajan, Vanessa Klotzman, Midori Kondo, Sandip Godambe, Adam Gold, John Henderson, Steven Martel

Abstract read
In one paragraph

Article in JMIR medical informatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Radha NagarajanRady Children's Health, 1201 W La Veta Ave, Orange, CA, 92868, United States, 1 714-997-3000.ORCID 0009-0002-3423-6874
Vanessa KlotzmanRady Children's Health, 1201 W La Veta Ave, Orange, CA, 92868, United States, 1 714-997-3000.ORCID 0000-0001-9834-1927
Midori KondoFred Hutch Cancer Center, Seattle, WA, United States.ORCID 0000-0002-0358-3075
Sandip GodambeRady Children's Health, 1201 W La Veta Ave, Orange, CA, 92868, United States, 1 714-997-3000.ORCID 0000-0001-9033-4159
Adam GoldRady Children's Health, 1201 W La Veta Ave, Orange, CA, 92868, United States, 1 714-997-3000.ORCID 0009-0001-7083-4364
John HendersonRady Children's Health, 1201 W La Veta Ave, Orange, CA, 92868, United States, 1 714-997-3000.ORCID 0009-0001-0739-639X
Steven MartelRady Children's Health, 1201 W La Veta Ave, Orange, CA, 92868, United States, 1 714-997-3000.ORCID 0009-0008-5564-3827

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Large language models (LLMs) continue to enjoy enterprise-wide adoption in health care while evolving in number, size, complexity, cost, and most importantly performance. Performance benchmarks play a critical role in their ranking across community leaderboards and subsequent adoption. Objective: Given the small operating margins of health care organizations and growing interest in LLMs and conversational artificial intelligence (AI), there is an urgent need for objective approaches that can assist in identifying viable LLMs without compromising their performance. The objective of the present study is to generate taxonomy portraits of medical LLMs (n=33) whose domain-specific and domain non-specific multivariate performance benchmarks were available from Open-Medical LLM and Open LLM leaderboards on Hugging Face. Methods: Hierarchical clustering of multivariate performance benchmarks is used to generate taxonomy portraits revealing inherent partitioning of the medical LLMs across diverse tasks. While domain-specific taxonomy is generated using nine performance benchmarks related to medicine from the Hugging Face Open-Medical LLM initiative, domain non-specific taxonomy is presented in tandem to assess their performance on a set of six benchmarks and generic tasks from the Hugging Face Open LLM initiative. Subsequently, non-parametric Wilcoxon rank-sum test and linear correlation are used to assess differential changes in the performance benchmarks between two broad groups of LLMs and potential redundancies between the benchmarks. Results: Two broad families of LLMs with statistically significant differences (α=.05) in performance benchmarks are identified for each of the taxonomies. Consensus in their performance on the domain-specific and domain non-specific tasks revealed robustness of these LLMs across diverse tasks. Subsequently, statistically significant correlations between performance benchmarks revealed redundancies, indicating that a subset of these benchmarks may be sufficient in assessing the domain-specific performance of medical LLMs. Conclusions: Understanding medical LLM taxonomies is an important step in identifying LLMs with similar performance while aligning with the needs, economics, and other demands of health care organizations. While the focus of the present study is on a subset of medical LLMs from the Hugging Face initiative, enhanced transparency of performance benchmarks and economics across a larger family of medical LLMs is needed to generate more comprehensive taxonomy portraits for accelerating their strategic and equitable adoption in health care.

Indexed as

Artificial IntelligenceClassificationLanguageBenchmarkingHumansLarge Language Modelshealth carelarge language modelsperformance benchmarkredundancytaxonomy

Identifiers

PMID41060040
PMCPMC12505401

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.