Evidence map›Paper›PMID 41057943›Full record

ArticleGenome biology2025

Structural and evolutionary features of red algal UV sex chromosomes.

Agnieszka P Lipinska, Guillaume Cossard, Paul Epperlein, Tobias Woertwein, Cecile Molinier, Olivier Godfroy, Sabrina Carli, Ligia Ayres-Ostrock, Emma Lavaut, Fabiana Marchi and 8 more

Abstract read
In one paragraph

Article in Genome biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Agnieszka P Lipinska *Department of Algal Development and Evolution, Max Planck Institute for Biology Tubingen, Tubingen, Germany. agnieszka.lipinska@tuebingen.mpg.de.
Guillaume Cossard *Department of Algal Development and Evolution, Max Planck Institute for Biology Tubingen, Tubingen, Germany.
Paul EpperleinDepartment of Algal Development and Evolution, Max Planck Institute for Biology Tubingen, Tubingen, Germany.
Tobias WoertweinDepartment of Algal Development and Evolution, Max Planck Institute for Biology Tubingen, Tubingen, Germany.
Cecile MolinierDepartment of Algal Development and Evolution, Max Planck Institute for Biology Tubingen, Tubingen, Germany.
Olivier GodfroyUMR 8227, Laboratory of Integrative Biology of Marine Models, CNRS, Sorbonne Université, Station Biologique de Roscoff, Roscoff, France.
Sabrina CarliDepartment of Algal Development and Evolution, Max Planck Institute for Biology Tubingen, Tubingen, Germany.
Ligia Ayres-OstrockBotany Department, Biosciences Institute, University of São Paulo, São Paulo, SP, Brazil.
Emma LavautDispersal Speciation and Evolution of Marine Species, Department Adaptation et Diversité en Milieu Marin, AD2M, CNRS, Sorbonne Universite, Station Biologique de Roscoff, Roscoff, France.
Fabiana MarchiBotany Department, Biosciences Institute, University of São Paulo, São Paulo, SP, Brazil.
Stephane MaugerDispersal Speciation and Evolution of Marine Species, Department Adaptation et Diversité en Milieu Marin, AD2M, CNRS, Sorbonne Universite, Station Biologique de Roscoff, Roscoff, France.
Christophe DestombeDispersal Speciation and Evolution of Marine Species, Department Adaptation et Diversité en Milieu Marin, AD2M, CNRS, Sorbonne Universite, Station Biologique de Roscoff, Roscoff, France.
Mariana C OliveiraBotany Department, Biosciences Institute, University of São Paulo, São Paulo, SP, Brazil.
Estela M PlastinoBotany Department, Biosciences Institute, University of São Paulo, São Paulo, SP, Brazil.
Stacy A Krueger-HadfieldDepartment of Biology, University of Alabama at Birmingham, Birmingham, AL, USA. sakh@vims.edu.
Marie-Laure GuilleminNúcleo Milenio MASH, Facultad de Ciencias, Instituto de Ciencias Ambientales y Evolutivas, Universidad Austral de Chile, Valdivia, Chile. marielaure.guillemin@gmail.com.
Myriam ValeroDispersal Speciation and Evolution of Marine Species, Department Adaptation et Diversité en Milieu Marin, AD2M, CNRS, Sorbonne Universite, Station Biologique de Roscoff, Roscoff, France. valero@sb-roscoff.fr.
Susana M CoelhoDepartment of Algal Development and Evolution, Max Planck Institute for Biology Tubingen, Tubingen, Germany. susana.coelho@tuebingen.mpg.de.

Funding

European Research Council 864038Fondecyt 1221456 and 1221477
6 · The paper itself

Abstract

backgroundSex chromosomes in red algae have remained relatively understudied, despite their fundamental role in understanding the evolution of sex determination across eukaryotes. In this study, we investigate the structure, gene composition, and evolutionary history of the U and V sex chromosomes in four Gracilaria species, which diverged approximately 100 million years ago.

resultsOur findings reveal that UV sex chromosomes, previously identified in green and brown algae as well as bryophytes, have also evolved in red algae, contributing to the diversity of sex determination systems across eukaryotes. The shared orthology of conserved sex-determining region genes between Gracilaria and distantly related red algae suggests that this system may have originated approximately 390 million years ago, making it one of the oldest known sex chromosome systems. The sex-determining region in Gracilaria is relatively small but contains conserved gametologs and V-specific genes involved in transcriptional regulation and signaling, suggesting their essential role in sexual differentiation. Unlike the conserved V-specific genes, U-specific genes appear absent, pointing to a dominant role of the V chromosome in sex determination. Despite their ancient origin, the sex chromosomes show low levels of degeneration, likely due to haploid purifying selection during the gametophytic phase of the life cycle.

conclusionsThis study provides the first large-scale comparative genomic and transcriptomic analysis of the U and V sex chromosomes across multiple red algal species, preparing the ground for future studies on reproductive life cycles and speciation in this understudied group of eukaryotes.

Indexed as

Chromosomes, PlantEvolution, MolecularGracilariaRhodophytaSex ChromosomesSex Determination ProcessesGracilariaRhodophytaSex-biased gene expressionUV sex chromosomes

Identifiers

PMID41057943
PMCPMC12502185

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.