Evidence map›Paper›PMID 41055858›Full record

ArticleJournal of computer-aided molecular design2025

Predicting drug-target affinity through triple pre-activated random residual planet convolution coupled attention network and contact maps.

M Sudha, B Senthilnayaki, K Padmanaban, L Guganathan

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of computer-aided molecular design, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

M SudhaDepartment of Electronics and Communication Engineering, SNS College of Technology, Saravanampatti, Coimbatore, Tamil Nadu, India. gunasudhaa@gmail.com.
B SenthilnayakiDepartment of Information Technology, St. Joseph's Institute of Technology OMR, Chennai, Tamil Nadu, India.
K PadmanabanDepartment of Computer Science and Engineering, Koneru Lakshmaiah Education Foundation, Vaddeswaram, AP, India.
L GuganathanDepartment of Physics, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Science (SIMATS), Thandalam, Chennai, 602105, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drug discovery relies on the ability to predict drug-target affinity (DTA), which allows for the efficient identification of drug candidates for certain protein targets. Scalability, accuracy, and interpretability are issues that traditional methods must deal with. In order to improve prediction accuracy, this study proposes a sophisticated approach that combines contact map representations with the Triple Pre-Activated Random Residual Planet Convolution Attention Network (Tri-Pre-A2RP-2CAN). The DTA, KIBA, and Davis datasets are the sources of the input data. Preprocessing employs Focal Vision Transformer with a Gabor Filter for feature enhancement. Feature extraction uses a Dual-Aggregation Transformer (DAT) to capture complex molecular and protein patterns. The modeling framework incorporates Tri-Pre-A2RP-2CAN and RCNN, optimized with PACRTAMN architecture and Planet optimization based hyperparameter tuning. This innovative approach achieves 99.9% accuracy, outperforming existing methods in modeling drug-target interactions. It enhances DTA prediction, improves molecular interaction analysis, and optimizes drug discovery processes, offering scalable and interpretable solutions for pharmaceutical advancements.

Indexed as

Drug DiscoveryNeural Networks, ComputerProteinsAlgorithmsHumansProteinsDual-aggregation transformerFocal vision transformer with gabor filter-based pre-processing techniquePlanet optimizationPre-activated convolution residual and triple attention mechanism network (PACRTAMN)Predicting drug-target affinityRandom-coupled neural network (RCNN)

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.