Evidence map›Paper›PMID 41054421›Full record

ArticleiLIVER2025

Integrated multi-omics analysis identifies TPX2 as a potential prognostic and immunological biomarker in hepatocellular carcinoma.

Hui Peng, Yong-Peng Wei, Xin-Bo Liu, Yu Wang, Jian-Yong Yuan

Abstract read
In one paragraph

Article in iLIVER, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hui PengDepartment of General Surgery, Xiangxi Tujia and Miao Autonomous Prefecture Ethnic Traditional Chinese Medicine Hospital, Xiangxi Tujia and Miao Autonomous Prefecture 416000, Hunan, China.
Yong-Peng WeiDepartment of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai 200438, China.
Xin-Bo LiuDepartment of Hepatobiliary Pancreatic Surgery, Yueyang Hospital of Integrated Traditional Chinese and Western Medicine, Shanghai University of Traditional Chinese Medicine, Shanghai 200437, China.
Yu WangDepartment of Hepatobiliary Surgery, Eastern Hepatobiliary Surgery Hospital, Naval Medical University, Shanghai 200438, China.
Jian-Yong YuanDepartment of Hepatobiliary Pancreatic Surgery, Yueyang Hospital of Integrated Traditional Chinese and Western Medicine, Shanghai University of Traditional Chinese Medicine, Shanghai 200437, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background and aims: Hepatocellular carcinoma (HCC) is a leading cause of cancer-related mortality worldwide, characterized by aggressive behavior, limited therapeutic efficacy, and poor patient outcomes. TPX2, a microtubule-associated protein essential for mitotic spindle formation, has been associated with tumorigenesis in various cancers. However, its functional significance in shaping the immune landscape and influencing treatment sensitivity in HCC remains insufficiently elucidated. Methods: We conducted an integrated multi-omics analysis using transcriptomic (TCGA, GTEx, GEO), proteomic (CPTAC), and pharmacogenomic (GDSC, PRISM, CTRP) datasets to assess TPX2 expression patterns in HCC. We performed differential expression analysis, survival analysis, Cox regression, and nomogram construction. Co-expression modules were identified via weighted gene co-expression network analysis (WGCNA), followed by GO and KEGG enrichment analyses. The correlations between TPX2 expression levels and immune and genomic features were examined, and drug sensitivity associations were evaluated. Results: TPX2 was consistently overexpressed in HCC tissues and associated with advanced tumor stage, higher grade, and poor survival. WGCNA revealed TPX2-enriched modules linked to cell cycle and DNA replication pathways. High TPX2 expression levels were correlated with immunosuppressive features, including reduced lymphocyte infiltration, lower IFN-γ response, and increased expression levels of immune checkpoint molecules (PD-1, CTLA-4, HAVCR2). TPX2-high tumors also exhibited greater genomic instability. Drug sensitivity analysis indicated resistance to several chemotherapeutics, but increased sensitivity to mitotic inhibitors and targeted agents. Conclusions: TPX2 is a key driver of proliferation and immune evasion in HCC, potentially serving as a diagnostic and prognostic biomarker to guide treatment strategies involving mitotic- or immune-based therapies.

Indexed as

BiomarkerHepatocellular carcinomaImmune evasionTPX2

Identifiers

PMID41054421
PMCPMC12496236

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.