Evidence map›Paper›PMID 41053888›Full record

ArticleMicrobial cell factories2025

Production of triacetic acid lactone from oleic acid by engineering the yeast Candida viswanathii.

Saptarshi Ghosh, Alex Hutagalung, Yuqian Gao, Javier E Flores, Yichao Han, Joonhoon Kim, Meagan C Burnet, Young-Mo Kim, Alberto Rodriguez

Abstract read
In one paragraph

Article in Microbial cell factories, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Saptarshi GhoshDOE Agile BioFoundry, Emeryville, CA, 94608, USA.
Alex HutagalungPyrone Systems Inc, San Diego, CA, 92130, USA.
Yuqian GaoDOE Agile BioFoundry, Emeryville, CA, 94608, USA.
Javier E FloresBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99352, USA.
Yichao HanDOE Agile BioFoundry, Emeryville, CA, 94608, USA.
Joonhoon KimDOE Agile BioFoundry, Emeryville, CA, 94608, USA.
Meagan C BurnetDOE Agile BioFoundry, Emeryville, CA, 94608, USA.
Young-Mo KimDOE Agile BioFoundry, Emeryville, CA, 94608, USA.
Alberto RodriguezDOE Agile BioFoundry, Emeryville, CA, 94608, USA. alberto@lbl.gov.

Funding

Bioenergy Technologies Office DE-AC02-05CH11231
6 · The paper itself

Abstract

Triacetic acid lactone (TAL) is a promising platform chemical to produce valuable compounds. The development of engineered microbial hosts to efficiently produce TAL from lipid-containing waste streams could be a cost-effective, sustainable and environmentally friendly approach to meet the industrial demand. In this study, we engineered the yeast Candida viswanathii, possessing robust fatty acid conversion capabilities, to develop an alternative route for TAL production from fatty acids that aims to maximize conversion of the acetyl-CoA pool generated by β-oxidation in the peroxisome. To do so, we inactivated the carnitine acetyltransferase gene to block the transport of acetyl-CoA out of the peroxisome and overexpressed the enzymes methylmalonyl-CoA carboxyltransferase, 2-pyrone synthase and pyruvate carboxylase in the peroxisome to convert acetyl-CoA into TAL. We also performed an adaptive laboratory evolution experiment to obtain mutants with higher growth rate in medium with oleic acid and observed marked differences in central carbon metabolism and organic acid production pathways between the evolved and parental strains. These strains were further engineered by integrating additional copies of TAL biosynthetic genes while reducing competing reactions like ω-oxidation and Lipid biosynthesis, resulting in up to 50-fold increase in titers relative to the initial strain, reaching 280 mg/L. This study contributes to the development of bioprocesses that valorize fatty acids as microbial conversion substrates for the production of valuable compounds.

Indexed as

CandidaLactonesMetabolic EngineeringOleic AcidAcetyl Coenzyme APeroxisomesPyronesAcetyl Coenzyme ALactonesOleic AcidPyronestriacetic acid lactone

Identifiers

PMID41053888
PMCPMC12502205

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.