Evidence map›Paper›PMID 41053677›Full record

ArticleBMC oral health2025

Integrated bioinformatics analysis identifies glutathione metabolism-related genes as diagnostic biomarkers for periodontitis.

Leilei Meng, Haoshu Fang, Wenjie Wen

Abstract read
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Article in BMC oral health, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Leilei MengDepartment of Pathophysiology, School of Basic Medical Sciences, Anhui Medical University, Hefei, 230000, China.
Haoshu FangDepartment of Pathophysiology, School of Basic Medical Sciences, Anhui Medical University, Hefei, 230000, China. fanghaoshu@ahmu.edu.cn.
Wenjie WenAnhui Province Engineering Research Center for Dental Materials and Application, School of Stomatology, Wannan Medical College, Wuhu, 241002, China. 20230025@wnmc.edu.cn.

Funding

Anhui Province Engineering Research Center for dental materials and application 2024AMCD06Program for Excellent Sci-tech innovation Teams of Universities in Anhui Province 2023AH010073the Doctoral Research Initiation Fund of Wannan medical college WYRCQD2023028
6 · The paper itself

Abstract

backgroundPeriodontitis affects over 1 billion people globally, with oxidative stress and glutathione depletion playing crucial roles in disease progression. This study aimed to identify glutathione metabolism-related genes as diagnostic biomarkers for periodontitis using integrated bioinformatics approaches.

methodsWeighted Gene Co-expression Network Analysis (WGCNA) was performed on independent datasets. Key genes were identified in combination with GSE16134 dataset differential expression analysis, which were then validated in the GSE10334 dataset. Immune infiltration analysis using CIBERSORT algorithm, consensus clustering for molecular subtyping, and competing endogenous RNA (ceRNA) network construction were conducted to explore regulatory mechanisms. Drug-gene interaction analysis and molecular docking studies identified potential therapeutic compounds. Experimental validation was performed using ligature-induced periodontitis in rats.

resultsThree key glutathione metabolism-related genes were identified: GSTA4 and GGT6 (downregulated) and SLC7A11 (upregulated) in periodontitis patients. The diagnostic model achieved superior performance with AUC values exceeding 0.8. Two distinct molecular subtypes were identified based on immune infiltration patterns. ceRNA regulatory network analysis revealed complex interactions involving all three genes. Drug-gene interaction analysis revealed erastin as a potential therapeutic compound targeting SLC7A11. Experimental validation in rat periodontitis confirmed the upregulation of SLC7A11 in periodontal tissues.

conclusionsOur study identifies SLC7A11, GSTA4, and GGT6 as robust periodontitis biomarkers with excellent diagnostic accuracy. The continuous up-regulation and experimental verification of SLC7A11 genes have established them as promising therapeutic targets, laying the foundation for precision medicine in the field of periodontal therapy.

Indexed as

Computational BiologyGlutathionePeriodontitisAmino Acid Transport System y+AnimalsBiomarkersGene Regulatory NetworksGlutathione TransferaseHumansMaleMolecular Docking SimulationRatsAmino Acid Transport System y+BiomarkersGlutathioneGlutathione TransferaseSLC7A11 protein, humanBiomarkersGlutathione metabolismPeriodontitisPrecision medicineSLC7A11

Identifiers

PMID41053677
PMCPMC12502236

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.