Evidence map›Paper›PMID 41052335›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Ab initio machine-learning simulation of calcium carbonate from aqueous solutions to the solid state.

Pablo M Piaggi, Julian D Gale, Paolo Raiteri

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Committors without Descriptors.Journal of chemical theory and computation · 2026
    Article
  4. Machine learning in chemistry.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Ab initio machine-learning simulation of calcium carbonate from aqueous solutions to the solid state.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Pablo M PiaggiCIC nanoGUNE BRTA, Donostia-San Sebastián 20018, Spain.ORCID 0000-0003-0225-0081
Julian D GaleSchool of Molecular and Life Sciences, Curtin University, Perth, WA 6845, Australia.ORCID 0000-0001-9587-9457
Paolo RaiteriSchool of Molecular and Life Sciences, Curtin University, Perth, WA 6845, Australia.ORCID 0000-0003-0692-0505

Funding

Department of Education and Training | Australian Research Council (ARC) FL180100087EC | Horizon 2020 Framework Programme (H2020) H2020-MSCA-COFUND-2020-101034228-WOLFRAM2
6 · The paper itself

Abstract

A first-principles machine-learning model has been developed aimed at studying the formation of calcium carbonate from aqueous solution using molecular dynamics simulations. The model, dubbed strongly constrained and appropriately normed-machine learning (SCAN-ML), reproduces accurately the potential energy surface derived from ab initio density-functional theory within the SCAN approximation for the exchange and correlation functional. A broad range of properties have been calculated relevant to ions in solution, solid phases, and the calcite/water interface. Careful comparison with results from experiments and semiempirical force fields shows that SCAN-ML provides an excellent description of this system, surpassing state-of-the-art force fields for many properties, while providing a benchmark for many quantities that are currently beyond the reach of direct ab initio molecular dynamics. A key feature of SCAN-ML is its ability to capture chemical reactions, which reveals that calcium carbonate ion pair formation occurs predominantly via binding of calcium to bicarbonate, with the subsequent loss of a proton to water, rather than by direct association. Our model thus paves the way for the ab initio study of reactive crystallization pathways in biominerals, which are currently poorly understood.

Indexed as

aqueous solutionscalcium carbonatedensity-functional theorymachine learningmolecular dynamics

Identifiers

PMID41052335
PMCPMC12541341

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.