Evidence map›Paper›PMID 41050996›Full record

ArticleAnalytical chemistry2025

Calibration for Quantitative Chemical Analysis in IR Microscopic Imaging.

Eirik Almklov Magnussen, Boris Zimmermann, Simona Dzurendova, Ondrej Slany, Valeria Tafintseva, Kristian Hovde Liland, Kristin To̷ndel, Volha Shapaval, Achim Kohler

Abstract read
In one paragraph

Article in Analytical chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Eirik Almklov MagnussenFaculty of Science and Technology, Norwegian University of Life Sciences, Ås, Akershus 1432, Norway.ORCID 0000-0002-7796-8170
Boris ZimmermannFaculty of Science and Technology, Norwegian University of Life Sciences, Ås, Akershus 1432, Norway.
Simona DzurendovaFaculty of Chemistry, Brno University of Technology, Brno 60190, South Moravia, Czech Republic.
Ondrej SlanyFaculty of Science and Technology, Norwegian University of Life Sciences, Ås, Akershus 1432, Norway.
Valeria TafintsevaFaculty of Science and Technology, Norwegian University of Life Sciences, Ås, Akershus 1432, Norway.
Kristian Hovde LilandFaculty of Science and Technology, Norwegian University of Life Sciences, Ås, Akershus 1432, Norway.
Kristin To̷ndelFaculty of Science and Technology, Norwegian University of Life Sciences, Ås, Akershus 1432, Norway.
Volha ShapavalFaculty of Science and Technology, Norwegian University of Life Sciences, Ås, Akershus 1432, Norway.
Achim KohlerFaculty of Science and Technology, Norwegian University of Life Sciences, Ås, Akershus 1432, Norway.ORCID 0000-0001-5759-1989

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Infrared spectroscopy of macroscopic samples can be calibrated against reference analysis, such as lipid profiles acquired by gas chromatography, and serve as a fast, low-cost, quantitative analytical method. Calibration of infrared microspectroscopic images against reference data is in general not feasible, and thus spatially resolved quantitative analysis from infrared spectral data has not been possible so far. In this work, we present a deep learning-based calibration transfer method to adapt regression models established for macroscopic infrared spectroscopic data to apply to microscopic pixel spectra of hyperspectral IR images. The calibration transfer is accomplished by transferring microspectroscopic infrared spectra to the domain of macroscopic spectra, which enables the use of models obtained for bulk measurements. This allows us to perform quantitative chemical analysis in the imaging domain based on infrared microspectroscopic measurements. We validate the suggested microcalibration approach on microspectroscopic data of oleaginous filamentous fungi, which is calibrated toward lipid profiles obtained by gas chromatography and measurements of glucosamine content to perform quantitative infrared microspectroscopy.

Indexed as

LipidsMicroscopyCalibrationChromatography, GasSpectrophotometry, InfraredLipids

Identifiers

PMID41050996
PMCPMC12529472

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.