Evidence map›Paper›PMID 41047469›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2025

Arabidopsis TRB Proteins Form Two Closely Related Complexes to Mediate H3K4me3 Demethylation and Transcriptional Repression.

Qi Wang, Dan-Yang Yuan, Yu-Jia Lu, Xin Wang, Hao Zheng, Lin Li, She Chen, Xin-Jian He

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Qi WangCollege of Life Sciences, Beijing Normal University, Beijing, 100875, China.
Dan-Yang YuanNational Institute of Biological Sciences, Beijing, 102206, China.
Yu-Jia LuNational Institute of Biological Sciences, Beijing, 102206, China.
Xin WangNational Institute of Biological Sciences, Beijing, 102206, China.
Hao ZhengNational Institute of Biological Sciences, Beijing, 102206, China.
Lin LiNational Institute of Biological Sciences, Beijing, 102206, China.
She ChenNational Institute of Biological Sciences, Beijing, 102206, China.
Xin-Jian HeCollege of Life Sciences, Beijing Normal University, Beijing, 100875, China.ORCID https://orcid.org/0000-0002-2878-7461

Funding

National Natural Science Foundation of China 32025003
6 · The paper itself

Abstract

The Arabidopsis telomere repeat binding proteins TRB1, TRB2, and TRB3 (TRB1/2/3) are components of the PWWP-EPCR-ARID-TRB (PEAT) complex, which is involved in histone acetylation and H2A deubiquitination. TRB1/2/3 also interact with the Polycomb Repressive Complex 2 (PRC2), which mediates H3 lysine 27 trimethylation. This study demonstrates that TRB1/2/3 can form two closely related complexes: TRB1/2/3-HELIX-TURN-HELIX-PROTEIN (TRHT) and TRB1/2/3-HISTONE-DEMETHYLASE (TRHD). The TRHT and TRHD (TRHT/TRHD) complexes occupy numerous common target genes across the genome and are required for H3K4me3 demethylation mediated by the histone demethylase JMJ14. Within the TRHT/TRHD complexes, the transcriptional repressors TRB1/2/3 and NAC050/052 bind to distinct DNA motifs and cooperate to mediate the association of these complexes with their target genes. Compared to PEAT target genes with high H3K4me3 levels and PRC2 target genes with low H3K4me3 levels, TRHT/TRHD target genes display low-to-medium levels of H3K4me3. At TRHT/TRHD target genes, JMJ14-mediated H3K4me3 demethylation is enhanced when these genes are shared with PRC2 target genes and is suppressed when they are shared with PEAT target genes. These findings reveal how the newly identified TRHT/TRHD complexes cooperate with the PEAT and PRC2 complexes to regulate multiple histone modifications and gene transcription across the genome.

Indexed as

ArabidopsisArabidopsis ProteinsHistonesDemethylationGene Expression Regulation, PlantMethylationArabidopsis Proteinshistone H3 trimethyl Lys4HistonesH3K4me3histone demethylationJMJ14transcriptional repressionTRB1

Identifiers

PMID41047469
PMCPMC12713088

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.