Evidence map›Paper›PMID 41047203›Full record

ArticleMethods in enzymology2025

De Novo design of α-helical heme binding proteins capable of versatile cofactor ligation.

Iago A Modenez, Anabella Ivancich, Vincent L Pecoraro

Abstract read
In one paragraph

Article in Methods in enzymology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Iago A ModenezDepartment of Chemistry, University of Michigan, Ann Arbor, MI, United States.
Anabella IvancichLaboratoire de Bioénergétique et Ingénierie des Protéines (UMR 7281), CNRS, Aix-Marseille Université, Marseille, France. Electronic address: aivancich@imm.cnrs.fr.
Vincent L PecoraroDepartment of Chemistry, University of Michigan, Ann Arbor, MI, United States. Electronic address: vlpec@umich.edu.

Funding

Designing Functional Metalloproteins-Equipment SupplementR01GM141086 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PECORARO, VINCENT L · 2021 to 2024
$1.3M
NIGMS NIH HHS R01 GM141086
6 · The paper itself

Abstract

De novo design of artificial metalloproteins offers a powerful approach to dissect and mimic the diverse and exquisite coordination environments found in natural heme proteins. These designed heme proteins seek to replicate the broad array of metabolic, regulatory, and structural functions that hemes perform in biological systems. In this chapter, we present an amenable methodology for the preparation and characterization of de novo-designed heme-binding coiled coils featuring either His- and/or Cys-based axial ligation, which mimic the redox active sites of peroxidases, chloroperoxidases, and cytochrome P450 monooxygenases. The ability to reversibly control heme coordination and spin state through pH variations within a single scaffold provides novel insights into the principles governing catalysis in heme-containing and heme-binding proteins and paves the groundwork for engineering versatile catalysts with tailored reactivity.

Indexed as

HemeHeme-Binding ProteinsHemeproteinsProtein EngineeringCatalytic DomainCytochrome P-450 Enzyme SystemModels, MolecularOxidation-ReductionProtein Conformation, alpha-HelicalCytochrome P-450 Enzyme SystemHemeHeme-Binding ProteinsHemeproteinsArtificial metalloproteinsChloroperoxidaseCoiled coilsCytochrome P450 monooxygenaseHemePeroxidaseProtein design

Identifiers

PMID41047203
PMCPMC12781168

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.