Evidence map›Paper›PMID 41045130›Full record

ArticleThe ISME journal2025

Temperature mediates biodiversity and metabolism of culturable lignocellulose-degrading consortia from intertidal wetlands.

Jiyu Chen, Min Yang, Qichao Tu, Lu Lin

Abstract read
In one paragraph

Article in The ISME journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jiyu ChenInstitute of Marine Science and Technology, Shandong University, Qingdao, Shandong 266237, China.
Min YangInstitute of Marine Science and Technology, Shandong University, Qingdao, Shandong 266237, China.
Qichao TuInstitute of Marine Science and Technology, Shandong University, Qingdao, Shandong 266237, China.ORCID 0000-0002-3245-7545
Lu LinInstitute of Marine Science and Technology, Shandong University, Qingdao, Shandong 266237, China.ORCID 0000-0002-9663-6382

Funding

National Key Research and Development Project 2024YFD2401701National Natural Science Foundation of China 32370115National Natural Science Foundation of China 32570118Ocean Negative Carbon Emissions Program
6 · The paper itself

Abstract

Coastal bacteria play an important role in the conversion of terrestrial organic carbon (TerrOC). However, their ecological patterns and drivers remains elusive. Here, 180 bacterial communities from 10 regions along the Chinese coastline, covering an 18 000 km transect between 18.27°N and 39.82°N, were cultured under three typical lignocellulosic substrates, hardwood (aspen), softwood (pine), and herbaceous (rice straw), respectively. All the consortia showed a broad spectrum of TerrOC utilization, and displayed degradation capacities comparable with those previously established though preliminary in situ lignocellulose enrichment. Moreover, following the metabolic theory of ecology, annual average temperature of the sites stimulated community metabolism, even though all were cultured at 30°C. Consortia enriched on aspen exhibited the highest temperature sensitivity. 16S rRNA gene amplicon and metatranscriptomic sequencing analyses revealed temperature-dependent latitudinal diversity gradients, displaying a trend that was opposite of the temperature-diversity positive relationship observed in terrestrial lignin-degrading microbes. The community composition shifted to adapt to rising environmental temperature. To enhance lignin degradation, aspen consortia from high annual average temperature employed metabolic generalists, which induced expression of dypB centered gene families for lignin depolymerization and versatile pathways for degradation of lignin derivates. This study reveals the intrinsic drivers for coastal cultured lignocellulose degrading bacterial communities from an ecological perspective and deepens our understanding of the metabolic mechanisms in coastal TerrOC conversion.

Indexed as

BacteriaBiodiversityLigninMicrobial ConsortiaTemperatureWetlandsBiodegradation, EnvironmentalChinaDNA, BacterialPhylogenyRNA, Ribosomal, 16SDNA, BacterialLigninlignocelluloseRNA, Ribosomal, 16SChinese coastsculturable bacteria communitiesenvironmental temperaturelignocellulose degradation

Identifiers

PMID41045130
PMCPMC12551453

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.