Evidence map›Paper›PMID 41044311›Full record

ArticleScientific reports2025

CryoEMNet driven symmetry-aware molecular reconstruction through deep learning enhanced electron microscopy.

Saksham Arora, Shin-Hung Pan, Sudhakar Kumar, Sunil K Singh, Utkarsh Chauhan, Wadee Alhalabi, Varsha Arya, Bassma Saleh Alsulami, Ching-Hsien Hsu, Kwok Tai Chui and 1 more

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Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Saksham AroraCSE, Chandigarh College of Engineering and Technology, Sector 26, Chandigarh, India.
Shin-Hung PanDepartment of Information Management, Chaoyang University of Technology, Taichung, Taiwan. vincentpan@cyut.edu.tw.
Sudhakar KumarCSE, Chandigarh College of Engineering and Technology, Sector 26, Chandigarh, India.
Sunil K SinghCSE, Chandigarh College of Engineering and Technology, Sector 26, Chandigarh, India.
Utkarsh ChauhanCSE, Chandigarh College of Engineering and Technology, Sector 26, Chandigarh, India.
Wadee AlhalabiDepartment of Computer Science, Immersive Virtual Reality Research Group, King Abdulaziz University, Jeddah, Saudi Arabia.
Varsha AryaHong Kong Metropolitan University, Hong Kong SAR, China.
Bassma Saleh AlsulamiFaculty of Computing and Information Technology, King Abdulaziz University, Jeddah, Saudi Arabia.
Ching-Hsien HsuDepartment of Computer Science and Information Engineering, Asia University, Taichung, 413, Taiwan.
Kwok Tai ChuiHong Kong Metropolitan University, Hong Kong SAR, China.
Brij B GuptaDepartment of Computer Science and Information Engineering, Asia University, Taichung, 413, Taiwan. bbgupta@asia.edu.tw.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CryoEMNet introduces a symmetry-aware deep learning framework for molecular reconstruction in cryo-electron microscopy (cryo-EM), achieving high-resolution and structurally consistent 3D reconstructions. By incorporating molecular symmetry constraints within deep learning-based reconstruction, CryoEMNet effectively mitigates challenges associated with noise, structural heterogeneity, and particle misalignment. The framework employs unsupervised learning and transfer learning techniques to refine molecular details and optimize particle orientations, resulting in improved reconstruction accuracy. Multi-trial evaluations demonstrate that CryoEMNet achieves an average resolution of 3.78 Å to 3.81 Å, consistently outperforming existing methods such as EMPIAR. This improvement enhances the interpretability of reconstructed density maps and facilitates more precise structural analysis. This advancement significantly improves the interpretability of the resulting density maps and enables more precise structural analyses. By harnessing symmetry-aware deep learning, CryoEMNet establishes a reliable and scalable methodology for cryo-EM reconstruction, further advancing progress in structural biology and biomedical research.

Identifiers

PMID41044311
PMCPMC12494693

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.