Evidence map›Paper›PMID 41043392›Full record

ArticleMolecular cell2025

Targeted citrullination enables p53 binding to non-canonical sites.

Alexandra Indeglia, Andrea Valdespino, Giulia Pantella, Sarah Offley, Connor Hill, Maya Foster, Kaitlyn Casey, Hsin-Yao Tang, Anneliese M Faustino, Alessandro Gardini and 1 more

Abstract read
In one paragraph

Article in Molecular cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. The Dynamic Alliance of p53 and Metabolism in the Tumor Microenvironment Shapes Tumor Evolution.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Alexandra IndegliaProgram in Molecular and Cellular Oncogenesis, The Wistar Institute, Philadelphia, PA 19104, USA; Graduate Group in Biochemistry and Molecular Biophysics, the University of Pennsylvania Perelman School of Medicine, Philadelphia, PA 19104, USA. Electronic address: aindeglia@bwh.harvard.edu.
Andrea ValdespinoProgram in Molecular and Cellular Oncogenesis, The Wistar Institute, Philadelphia, PA 19104, USA; Cell and Molecular Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Giulia PantellaProgram in Molecular and Cellular Oncogenesis, The Wistar Institute, Philadelphia, PA 19104, USA; University of Bologna, Bologna, Italy.
Sarah OffleyProgram in Gene Regulation and Cell Signaling, The Wistar Institute, Philadelphia, PA 19104, USA; Cell and Molecular Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Connor HillProgram in Gene Regulation and Cell Signaling, The Wistar Institute, Philadelphia, PA 19104, USA; Cell and Molecular Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Maya FosterProgram in Molecular and Cellular Oncogenesis, The Wistar Institute, Philadelphia, PA 19104, USA; Cell and Molecular Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Kaitlyn CaseyProgram in Molecular and Cellular Oncogenesis, The Wistar Institute, Philadelphia, PA 19104, USA; Cancer Biology Program, St Joseph's University, Philadelphia, PA, USA.
Hsin-Yao TangProgram in Molecular and Cellular Oncogenesis, The Wistar Institute, Philadelphia, PA 19104, USA; Proteomics and Metabolomics Shared Resource, The Wistar Institute, Philadelphia, PA 19104, USA.
Anneliese M FaustinoProteomics and Metabolomics Shared Resource, The Wistar Institute, Philadelphia, PA 19104, USA.
Alessandro GardiniProgram in Gene Regulation and Cell Signaling, The Wistar Institute, Philadelphia, PA 19104, USA.
Maureen E MurphyProgram in Molecular and Cellular Oncogenesis, The Wistar Institute, Philadelphia, PA 19104, USA. Electronic address: mmurphy@wistar.org.

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Nan Zhang · 1985 to 2026
$75.9M
TRAINING PROGRAM IN BASIC CANCER RESEARCHT32CA009171 · NCI · WISTAR INSTITUTE · PI Alessandro Gardini · 1985 to 2026
$15.3M
Functional Analysis of p53 Polymorphic Variants - Diversity SupplementR01CA102184 · NCI · WISTAR INSTITUTE · PI Maureen E. Murphy · 2005 to 2026
$7.4M
Advancing Cancer Research through Comprehensive Proteomics and Metabolomics AnalysesR50CA221838 · NCI · WISTAR INSTITUTE · PI Hsin-Yao Tang · 2017 to 2026
$2.1M
Purchase of a SARRP 200 Platform for IrradiationS10OD030244 · OD · WISTAR INSTITUTE · PI MURPHY, MAUREEN E. · 2022 to 2022
$600k
Role of PADI4 as a key epigenetic regulator of the p53 pathway and tumor suppressionF31CA277953 · NCI · UNIVERSITY OF PENNSYLVANIA · PI INDEGLIA, ALEXANDRA · 2023 to 2024
$55k
NCI NIH HHS F31 CA277953NCI NIH HHS P30 CA010815NCI NIH HHS R01 CA102184NCI NIH HHS R50 CA221838NCI NIH HHS T32 CA009171NIH HHS S10 OD030244
6 · The paper itself

Abstract

TP53 encodes for the transcription factor p53, which binds to a diverse set of target genes in response to stress. Activation of p53 results in highly specific transcriptional responses, but the regulation of promoter selectivity by p53 is poorly understood. Here, we report that sequence-specific binding of p53 is regulated by its target gene and binding partner peptidyl-arginine deiminase 4 (PADI4). PADI4 enzymatically converts peptidyl-arginine to peptidyl citrulline in a process known as citrullination. We show that PADI4 citrullinates p53 at the C terminus in vitro, and we confirm two citrullination events in cells and mouse tissue (R306 and R363). Chromatin immunoprecipitation sequencing (ChIP-seq) reveals that PADI4 expression causes a redirection of p53 away from a subset of canonical binding sites to target genes associated with ETS transcription factors. Chromatin profiling using citrullination-specific p53 antibodies supports this conclusion. These findings link citrullination to p53 function and illustrate how chromatin modifiers like PADI4 can direct the p53 transcriptional response.

Indexed as

CitrullinationProtein-Arginine Deiminase Type 4Tumor Suppressor Protein p53AnimalsArginineBinding SitesCell LineChromatin Immunoprecipitation SequencingCitrullineFemaleGene Expression RegulationHumansMiceMice, Inbred C57BLMice, KnockoutPromoter Regions, GeneticArginineCitrullinePADI4 protein, humanPadi4 protein, mouseProtein-Arginine DeiminasesProtein-Arginine Deiminase Type 4TP53 protein, humanTrp53 protein, mouseTumor Suppressor Protein p53cancercitrullinationELF2p53PADI4

Identifiers

PMID41043392
PMCPMC12671568

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.