Evidence map›Paper›PMID 41038904›Full record

ArticleScientific data2025

Spine endoscopic atlas: an open-source dataset for surgical instrument segmentation.

Zhipeng Xu, Hong Wang, Yongxian Huang, Jianjin Zhang, Yanhong Chen, Shangjie Wu, Zhouyang Hu, Guanghui Yue, Jax Luo, Guoxin Fan and 1 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Benchmarking deep learning pipelines for surgical instrument segmentation in endoscopic spine surgery: cross-dataset evaluation under deployment-realistic conditions.European spine journal : official publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Zhipeng Xu *Department of Pain Medicine, Shenzhen Nanshan People's Hospital, Shenzhen University Medical School, Shenzhen, 518052, China.
Hong Wang *Department of Pain Medicine, Shenzhen Nanshan People's Hospital, Shenzhen University Medical School, Shenzhen, 518052, China.
Yongxian Huang *School of Automotive and Transportation Engineering, Guangdong Polytechnic Normal University, Guangzhou, 510665, China.
Jianjin ZhangDepartment of Pain Medicine, Shenzhen Nanshan People's Hospital, Shenzhen University Medical School, Shenzhen, 518052, China.
Yanhong ChenDepartment of Pain Medicine, Shenzhen Nanshan People's Hospital, Shenzhen University Medical School, Shenzhen, 518052, China.
Shangjie WuGuangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen, 518060, China.
Zhouyang HuDepartment of Pain Medicine, Shenzhen Nanshan People's Hospital, Shenzhen University Medical School, Shenzhen, 518052, China.
Guanghui YueGuangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, National-Regional Key Technology Engineering Laboratory for Medical Ultrasound, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen, 518060, China.
Jax LuoNeurological Institute, Cleveland Clinic, 9500 Euclid Avenue, Cleveland, Ohio, 44195, USA. luoj2@ccf.org.
Guoxin FanDepartment of Pain Medicine, Shenzhen Nanshan People's Hospital, Shenzhen University Medical School, Shenzhen, 518052, China. fanguoxin@email.szu.edu.cn.
Xiang LiaoDepartment of Pain Medicine, Shenzhen Nanshan People's Hospital, Shenzhen University Medical School, Shenzhen, 518052, China. liaoxiang75@email.szu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endoscopic spine surgery (ESS) is a minimally invasive procedure used for spinal nerve decompression, herniated disc removal, and spinal fusion. Despite its many advantages, its steep learning curve poses a challenge to widespread adoption. The development of artificial intelligence (AI) systems is crucial for enhancing the precision and safety of ESS. The automatic segmentation of surgical instruments is a key step towards realizing intelligent surgical assistance systems. As such, this paper has created the Spine Endoscopic Atlas (SEA) dataset, a comprehensive collection of annotated images encompassing all instruments commonly used in spinal endoscopic surgery. In total, SEA contains 48,510 images and 10,662 instrument segmentations derived from real-world ESS. This dataset is specifically designed to train deep learning models for precise instrument segmentation. Through validation of five models, we demonstrate the dataset's value in improving segmentation accuracy under complex conditions, providing a foundation for future AI advancements in ESS.

Indexed as

EndoscopySpineSurgical InstrumentsDeep LearningHumans

Identifiers

PMID41038904
PMCPMC12491453

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.